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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: thi5
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCPSDFSSRS LFLEAKEEEY KQRRRVPLDS RRRVRRACLS CRAKKIRCSG SEPCQACIAT  60
   61 PSQCKYADSL KERTPSKQFI AELSQRQKCF EYLMELLCPS LPHDTRSLVK LCKHVESSLA 120
  121 SGSDVRSLLI PGSIDQSVLK VAATNNKDDS SAVKSANVSF PSSSTPPSSD SNFSSIQNTD 180
  181 LNTSIKFTEN ISANAIHVNQ DKVIRSANNL IINSQPILPV RSFLDALGEP IYLSPTSSTY 240
  241 FLNSVLASLQ LNSSNTPESL LIDYQSKIPE DLSSSLLPLE LNTLQSTPTS VSVGSASSQG 300
  301 THEYSIINLT SNHSSFSLKA LKKIAHNLLP PVSVAERYAN EFFLRYQSFF YFYPPSVFSN 360
  361 RYQILADGLV NSDTLDTGFL AVALLIVVLG HFSNNNINVL PKEVQLSHID SMIQISEQLI 420
  421 SSLLNRCTLS SIQAVFLLSL YHFLTGNFKC AYSYLGFAIH SAHTLGLEHG STDNSTLNEV 480
  481 STEETSIRIC WSLRVLASFL YIQSGITPII NLFPNGLNSL KLPTVVPELE ARHLPSSVFH 540
  541 FVAIIKYAEI SVRSLNSLYE SSSDYLMDVS NFPKLLLKVE RIYSQARNWK LNLTHQQLNG 600
  601 TNDTSDLLFH SNVSLHLFYH YLIVKVSCPI MFFYLNNWYS VKPSSFTKGL NNKPSLEDVF 660
  661 SNLETCYESA KAIVQLSSKL LSAGQMDKCF YLEFEILYCS AIVLFLFSVM HLGAENPLLE 720
  721 SIYLLEDMGS RTIDSKVRLE KLKSAIEIFD INSATEMPIN EPLSASFESV NKENSQSGYM 780
  781 AWQNWVTELS SSNIPLGHAL GNPESNNSSN SFKPSHPSQS FLVNESLDFS SNPKEPPFLP 840
  841 WSEALLNMDM QLNRLGP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle