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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC824.02
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDDKGRSDT VNGYYISNSK LSSGFYKRNN ANTASNDEKP NLEQNDIPSV TSSGSSTPSS  60
   61 ISIEKEIKIS KGNVIVKAIR SWSLYVAIIA ILLLLVILHS FQGRPQDNGC GKSYVWPSYV 120
  121 RFVDFDERYT RFANKYSLYL YREKSVEESD EPSGIPILFI PGNAGSYKQV RAFAAQAAHV 180
  181 YANAYAEDAD GTLNAGKLVP DFFVVDFNED FSAFHGQTLL DQAEYVNDAI PYILSLYRQN 240
  241 RKISSEYDNE AFPPPTSVIL LGHSMGGIVA QATFTMKNYV DGSVNTLITL ATPHAMAPLP 300
  301 FDRHLVEFYE SIKNFWSQSF LLSPEENSLD DVLLVSIAGG GLDTHVVPEY SSISTFVPPS 360
  361 NGLMVFTSGI PSVWAEIDHQ AMAWCENFRR VLIRGIFAIM DARTSKCTVS LNLRKELLSR 420
  421 AYIQGSSFQN DITQISKPIA QYKALDLDLT YVYSEMPGQL LFLNQLGVSY IRHHIFPIPK 480
  481 PTSSIDRFEL LTDQPIDLSS SNIKVLACRL DPKIDNTISA LLENGNNKVI NANCHLLREL 540
  541 VTLLPASTAY TSSPYGGDSF YNYVLPKEKM DDYHFILVSD DSKAPASGFV VGGFSNVSLD 600
  601 PKTIKGSQIE LFKSGRKFQF DTKGSISKRF RFPGIQSSIM AYTISVTYEL YPGAVPQKEF 660
  661 TPMLKQSIES PFETKYHVNM SNTELSVHGI SPFMEFFGKE SEKSLTLEFF LNPAIYKSVY 720
  721 VSIQPSYYRS AGRLLMRYRT LLASFPVVVI SLAAYNQFRY FHYGSAYLSM SAALEVMIRK 780
  781 GLIKLLFLVS ILSIAFSYLI SRVELIVADG ADPVASWKIF AMMVPKSFWK QNHLLFGLQT 840
  841 AQFWFLAPLL TLMFVGLVIT ASVIILCVMH LLAFIYGIYL RYKGLTFTGV CQAVKFSFQC 900
  901 LRTRNTRKLD HGEFKKLSSF LSQRNMYYAN PSLCYVYGKK HMQARIIGIM LLLLMAMTVV 960
  961 PFQLVYGVAL CTQTVTTAKA LHLARFCTKS SHYRKKLWDF YNFSCTITIL MLLLAPLDFP1020
 1021 VLIVWARNLS MHWSIPFPTH HNFFSIIPFI LLTEILRTGK MLPRLNDVEY YINNVFLFLL1080
 1081 SFYSLIYGAE KPYLIHNVVG LYFFWLLFLY AKNGFFVQNI SKWPIIPRMK YFIKHKFLRS1140
 1141 IS

YRC Informatics Platform - Version 3.0
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