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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AMT1_SCHPO
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTTDATPT PSGVNGGDSM TVNLNQFYNN GDVAWILTST ALVFIMIPGV GFFYSGLARR  60
   61 RSAISMLFLS MMSVAIVAFQ WFFWGYSLTF SHEGGPYIGS LANFGLRQTL GRPSSGASSV 120
  121 PDILFCVFQG MFAAITPALA IGAAADRGRM FPCMVFMFLW TSIVYDPIAF WTWNPNGWLN 180
  181 KLGSYDFAGG SPVHISSGMA ALAYSIVIGK RCDHGTTKYR PHNVPHVVLG TVFLWFGWFG 240
  241 FNGGSSAAAN MRGVMAVVVT HLAASVGGIV WCVIDFAKNR HWSVVGFCEG AVAGLVAITP 300
  301 GSGFVPPWAA VVIGALGAVF CYAATYLKKI IRVDDALDIF AEHGVGGMVG NILTALFAAD 360
  361 YIEALDGSGT AYTGGWITHH YIQLGYQLAD TVSCAAYSFA VSCALLFVMN YIPGLSLRVS 420
  421 REDEVLGLDK IELGESAYYY KDSTDEPPPI TTSGVQYTSP TVSDSASNEK EQEHRAQNEA 480
  481 QKEEEYRAES EAQAPAI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle