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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPCC1672.09
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQLPFIQRL KWEEYMALFL GFFFVIFEKL LSCLAFMIHN TLGLFYRSVV RNEIKKRSKK  60
   61 RSRSRSVSLQ RAKAIHDAAD IREMCKISGY YVEDHLVRTE DDYILCIHRI SKDSPGRIGS 120
  121 PHPKKLPVVY CHHGLLMNSE VWVCNVDPRN CLVFDLVNKG YDVWLGNNRG NKYSRQHLRF 180
  181 DSTDKEFWDF SIDDFAQYDI PDTIDYILKT SGQTKLTYIG FSQGTAQAFA SLSIHPLLND 240
  241 KINSLIALAP AISPKGLHNR VVDAFVKARP SILFFLFGRK SILPSAGFWQ SFLAPKFFDA 300
  301 VLAYCLSQLF NWSCQNISSY QRLVSFAHLY SYTSVKCLVH WFQIMRSAEF RMYDNDQLGH 360
  361 DYFLKYYKAA KFPTNNIRTP IYLIWGGSDS LVDIQAMLNA LPAEVEHVKV DSYEHLDMIW 420
  421 ADTVKDYVIP PVLRRLRDIH HPPEHEENDK ENREIQKNHI APRNKPI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle