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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC1E8.02
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEYRIRVTT VDQKVGIFQV PRTKTVLELK ELIAVTFEAP ADRLKLIHAG RVLRNETPLE  60
   61 EILHDATDLV TFHLVIAVFN STSTTLPSAT SSSVPQSRTS ELSSTNSIPT PRITSLNPEE 120
  121 LSRRERAQRL LQTYNSFHGS GLGGLFPNIH RELESHGFSL PTHEQSSPVA ESLDNSVSSA 180
  181 LSPHLETLRR RNLSIHHQHI QAHEMAQESL ETRNPGNISS SSAPLASDQS PTVSSNHIHA 240
  241 SGNLALGSNS GLNPRSPNSF SSPLDNPALH TVDSTNVNGS LSPLSNSSSI NQVHQNETHG 300
  301 STISVPNPNL SQMGPSHSSS VPSNLSPNPA QNENPSTTSI PSINNQPFPS GLSASNSNFA 360
  361 SSSFIPQSVP QLLPIYYQTI FYNGNYYLQQ LPSASPPTMF RDHSFAPLVS PSIVSPYGVL 420
  421 ENEETGECAF LFSPNASQPH FQPRAPTFGI PRNVRSLFTL PFFHTIRNIE RHFRLFIRLA 480
  481 LFCVLTTYNV SLSQTILLTS IMSVVFLLQT GALAPFINDN PLIQSGMRHI RNLQDEYRRR 540
  541 RNRTAQRVVE IPNETQTEDE QDGTNTPDNR ADAEERELTR SQRIYRTVVR TIVAFALSFV 600
  601 PRA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle