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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: mdl1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPIRFGLSR VPFAHCYNKR VIFRANYLVP LTWLKNNVAY KSTNTLLLPT PNAEYYSTSK  60
   61 LSSQVNVSLN SLSQKASSGS KIYPFKNSFP LPFSRSILPI RSLAFLKLCV RHNSTVPSKD 120
  121 EQAQDISKIN TNGTLQTPNK KVNVFRLFTL ARGQGWNFFI AGSLLLVSSG VTMSIPYIVG 180
  181 KILDAGSSGD SSVTHIMGIP SGTFYIGLLG LFFLGSACNF GRIITLRLLS ERIVSRLRAR 240
  241 LFAKCMSLDG AFFDFHKHGD LISRLTTDSS IVGKSLSMYL SDGLRSSVSA IAGIGMMLYV 300
  301 SMRLTGYMSL IVPPIALGAF FYGEYVRKLS RTTQDALGDL TRVSEEKLAN VRTTQAFLGE 360
  361 RQEVNRYNDY IRNLFVLAKR EAFASGIFFG STGFLGNATV IAILALGGRM VAAGDITVGQ 420
  421 LSSFLLYTVY AGGSIVGLSG CFTDIMKGLG AASRLFELLD AKPKIAPTVG IPVPVTVGKA 480
  481 ILSFRNVGFA YPTRPSASIF DNLSFDIHPG TNVAIVAPSG GGKSTISQLL LRFYAPSSGK 540
  541 ILADGVDIST YNVHQWRSHF GLVGQEPVLF SGTIGENIAY GKSNASQEEI EDAAKRANCS 600
  601 FVLSFPEKWS TQVGTRGLQL SGGQKQRIAI ARALLRNPAF LILDEATSAL DGEAEVMVDK 660
  661 TIQSLMHNRS MTTITIAHKL ATIRRADQII VVGDGKVLEQ GSFERLSRPG TNFYKLMRWQ 720
  721 LGKVEP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle