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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC821.13c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSGIAGDS NGFETNFLNE TTNREEDGAF NWNAADDGTN ERREDIHVRF QDSALPLGID  60
   61 ENELDEIDIN GDSKKLDSVE VDESHDVNSP SDSRLKSSFK SVLELTANSM VSVLTPSTKT 120
  121 EQTSKGKGKK KKAHVSFLEG PVEEIPLDDI EPTSPREASP VFNGRPPIPP EFLKSRHKEF 180
  181 TIPNPLQFIS NFLSNLFSRD TRYLKSSHGR IIIINPYDDS SQIDERTGKP YMQNSIVSSR 240
  241 YNKYNFVPLQ IIAQFSKTAN CYFLLIAIMQ MIPGWSTTGT YTTIIPLLIF ISIAILREGF 300
  301 DNYRRYRQDR VENRIQTQVL RHVDVDPPIV EEHSSFFRRR RWRRSRSQES ASRSTIRSTD 360
  361 EREPERTSED PPQLPPSPSS PSSPALSVKP NIDPQPPLYN STLTTTRSIP ANKPTFFWAS 420
  421 CDRKDVRVGD IIRLTSDQTL PADVIALSSP NPNGAIYIET AALDGETSLK TRLVNSTLRS 480
  481 LCKDINDLIR LSGTCTVEDP NGDLYNFNGS MKLDSIQGEI PLSNNDVLYR GSNLRNTSEL 540
  541 FALVIFTGEE SKIRMNAVRN VSVKAPSMQK VTNRIVIFIF ALVVSMAIYC TAAYFVWQKK 600
  601 VERKLWYLTN SKLSFVPILV SFIILYNTMV PISLYVSMEI IRVFQTFLVQ SDIDLYYPEN 660
  661 DTRCEVRSSS ILEELGQVTH VFSDKTGTLT DNIMLFRNLS VGGFAWQHVG AENPKLVSTS 720
  721 QKSDDLDGEA KPPQLENIQG TTIQLLQYVH DNPHTTFSKR VRIFLLNLAI CHTCLPSFDE 780
  781 ENQIYKYQSI SPDELALVHA AQQLGYIVID RDIDSLTIRL HYPLDPHSHP IAKTYRILNI 840
  841 IEFTSKRKCM SVIVRMPNGR ICLFCKGADS AIIKRLRLSN LAKRKDKSVT KAEQARKSIE 900
  901 IDKAIIRNSQ STSRPSLTAS RPSLSRRRND YINNVTSWLD ERREKMGVVR PRASTSILET 960
  961 RRRPAVGRHS LAGGERLMED KKYLSKQEEA EGSIYESLNH NDAKLFENTF EHVHAFATDG1020
 1021 LRTLMYAHRF IDESEYQSWK LVNDAALNSL SNRQQLLDEA ADLIEKDLEF AGATAIEDKL1080
 1081 QVGVPESINS LFRAGIKFWM LTGDKKETAI NIGHSCGVIK EYSTVVVMGS LDGVEGSDET1140
 1141 VSGGQRLSLD RPPTNDPASL MIHQLISCMN AIHSNSLAHL VIVIDGSTLA DIENDPELFL1200
 1201 LFINTAVEAD SVICCRSSPM QKALMVQKVR NTLEKAVTLA IGDGANDIAM IQEAHVGIGI1260
 1261 AGREGLQAAR SSDFSIGRFK FLIKLLFCHG RWSYVRLSKY ILGTFYKEQF FFLMQAIMQP1320
 1321 FVGYTGQSLY ESWGLTCFNT LFSSLCVIGL GIFEKDLSAS TVIAVPELYQ KGINNEAFNW1380
 1381 RVYFGWCSIA FIQAFLVFYV TYSLFGMKEL NDNNIFAYGQ LIFTAAIFIM NFKLVFIEMQ1440
 1441 YINIISIIVL VLTSLAWFLF NIFISEHYPD KNLYLARSQF LHHFGKNPSW WLTMLFVMVC1500
 1501 ALTIDIVAQM LRRTLRPTDT DIFVEMENDA FVRSRFEQES GEFLQANAPS VDEIEQYLKS1560
 1561 RD

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