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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gpt1
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWGFWFAIA TLITICYAAK PLDVKIAATF NAPSFSALIA ESLYQEKKEG FIWYLNHLSD  60
   61 LLDAENTTEK ELYINVVNSL KREYVLSDEE LSSLQFSLGL FSGAPKLQAF SSIVQSRSCD 120
  121 CDTWLQLDEE SQVCFSDLPK DSPLFSKLYS KNPLDYEVVK TSATGIPYAV VVTSFERDLI 180
  181 PFHELYYKLA LEGKCNYVIR YSPPSSSKLN SKLYVKGFGT HVSLKRTDYL VVDDREFPRE 240
  241 KGDNPASFTS SRNKRSNERL FGMTSDSLQT VTPDKIAILD LLATQSIASS TDMLTAFREL 300
  301 TQDFPIYAHY LSIQPDVSND LIEELNQFQS QYVPEGINTI WLNGLSLDLE ETDAFSILSL 360
  361 IKKEKDMFDR FEALGIKSSK VLDIVTNEAF ANEDSDFKFV KFHCQDDIED WKAIHWVNEI 420
  421 ESNPKYDNWP KSIQILLKPI YPGQLHMLGK QLHTVIYPIF PSSPSSLPLL SELIQFSRRP 480
  481 SPVQTGMVCA ANDDDEFAQT VCKSFFYISK ESGTDSALKF LYKCLNSDSS ADLYSLLEEH 540
  541 LPLSEHDDDT LANLKKDLSS SFFDHYMSKS NSWVNRLGID SSASEVIVNG RIISHDENYD 600
  601 RSMYGIFLED IPEVQIAVAE GKISEDDNLL DFILRDASLT RNPLVYPSAK SSIKSIDIKR 660
  661 VLENVGSLNH EDILLIGSSN AKYSFWLVAD FNEKEGLEIL SLLADLLSEN KDANLMLIQE 720
  721 GKNHVVPPLF AKLLSSPKRS SKHLQEILNS SLDPSSGVVN DMDKALKFLK KSKAVVKELG 780
  781 LTGECKSALL LNGRMICSFS VDSLNTADLK MLMQMEYDNY LSKLSNIAGS SRRLKNSRAI 840
  841 SFLSSYLKTL ESTPMSTSSP TKEEKLFPRD FIYNKLGVGN ATFETDDFSK AYYQFVAVLD 900
  901 PLSKDSQKWS AILEAVSKLN GVGVRIHFNP KQTLSELPLT RFYRYSISAE PEFDALGHLE 960
  961 ESYVEFDNLP ADTLLTMDIE ARDAWTVMQK DVDIDLFNIK LEHTSEAEAL DSHTAIYELK1020
 1021 NILVQGYSQE EFRKSPPRGM QLKLGNLTNS HVTDTIVLSN LGYFQLKANP GVWTLEPMDG1080
 1081 RSSQFYEILS LNKKNSYKDP QVIVDSFEGV TLNPVMRRKP GFESADIMDE DLSSHKFFDK1140
 1141 IKKSLSFFNF KRKEASINIF SVASGHLYER FLYIMTKSVI EHTDKKVKFW FIENFLSPSF1200
 1201 KSSIPAIAKK YNFEYEYITY NWPHWLRKQE EKQREIWGYK ILFLDVLFPL ELHKVIYVDA1260
 1261 DQIVRADLQE LMDMDLHGAP YGYTPMCDSR EEMEGFRFWK KGYWKKFLRG LKYHISALYV1320
 1321 VDLDRFRKMG AGDLLRRQYQ LLSADPNSLS NLDQDLPNHL QHLIPIYSLP QDWLWCETWC1380
 1381 SDESLKTAKT IDLCQNPLTK EKKLDRARRQ VSEWTSYDNE IASVLQTASS QSDKEFEEKD1440
 1441 NNSSPDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle