YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	rip1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAKQFISKS LASSLRRLLP VSSTASSLKG SMMTIPKFTS IRTYTDSPEM PDFSEYQTKS  60
   61 TGDRSRVISY AMVGTMGALT AAGAQATVHD FLASWSASAD VLAMSKAEVD LSKIPEGKNL 120
  121 VVKWQGKPVF IRHRTPEEIQ EANSVDISTL RDPQADSDRV QKPEWLVMIG VCTHLGCVPI 180
  181 GEAGDYGGWF CPCHGSHYDI SGRIRRGPAP LNLAIPAYTF EGSKIIIG

Type	Start	End	Confidence
Signal Peptide	1	27	0.76
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	228	0.95