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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2506923, gi|1...
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFHPTRPFG LYFEFFIIIS FFFTSESTGD VESFMKYSNV AFSEGLAGFD SLAHVYQALL  60
   61 KKSTCYQEVA ATLISKCSLL NTELTIDNRI HSAIQMTLCD FERSQILAPS ECVRGSQSEC 120
  121 VSKLESTSTW WLSFTSHFHD VNHLCRLANL EMQKELSIEV NMNVTLVQKQ FLEMVILHLR 180
  181 NFESVTDKMN QRIDKFDGKF NSVIENSFKD INFRVNQEIM GLVELQNHQQ EGMVQQKEIL 240
  241 STIKQLKSEI FDINSFFANF IEESAGYSNS LIEKLNEKFT SENAIALSAI GKYTSEFSAF 300
  301 MEKRIKNLIT TTEDSLQQSV QSNIDFVNSG FQPLYDLTIQ LKEELQSLKR LSSEQQNLQH 360
  361 EQILQWKSDF LNVSKDHLKV LQQLRPLIDI VEKFMNVYFK GLSNIISSFA FIGFTLFATL 420
  421 SSLFFKVLKI HRRPIIVFGS LSIIFIHIYC FKITSWVNLY GWITCTIART LSFIKLNIRT 480
  481 FYLTAFLCAL LNFLRYLKYR NSKKDTELSL FLPAPEECNI YHNEHIQVQE DNYLCPIENS 540
  541 LIDLFGSENN KEKLGKQENV RFAFLNSESL EQSPWWD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle