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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC1786.02
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.64
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFQSFYFLA LLLATAVYGQ VASPELHSLS RRNWKKPPPF PSTNASYAPV IRSCDSSEIM  60
   61 VNSLPRGELP DLENDFIEKR LSNANEALTT FLQSKNTTAD LDLSSIVGDN GPRLGIAVSG 120
  121 GGWRSMLFGG GALAALDSRS NETTLGGLLQ SAHYITGADG GSWLLSSLAV NEFRTIQNIS 180
  181 KSIWYTRLGI FFIEETHFGD LKNYYTNVVD EVNQKAAAGF NVSLTDYWGR AIARHFVGQL 240
  241 RGGPNLTYSS VQNASWFQTA EYPYPLIVTQ GLTGGLPDGS NGTATNSSIY EISPYYLTSF 300
  301 DNNVRSYTPT QYLGTNYSNG TAVDGKCVTQ FDNVGFLVGT SSTRYNEALI DVSLRQSRMS 360
  361 RRLGFTLRHM RINGSSVSFY PNPYTDATDI AGNATAVSED IVDTPYLDLF DGGYDGQNIP 420
  421 IWPLLQPERK LDVVFAFDSS GDTSNFWPNG SSLVATYERV TQRASDAVYD VEDFVHVPTP 480
  481 ETFVNLGLNA NPTFFGCDGR NTTRGDVPVD HNTPPLVVYM PNTPWTMKSN LVDHRYRIAN 540
  541 SEIQALIQNG FVATTQDNST DFASCLACAV VQRSLERRNQ STSAACQQCF SQYCWNGTVD 600
  601 NTPVDDDSKN PTYNPAVKTS SASGVHANIL LSFFVLLATL LVTA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle