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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PIGS_SCHPO
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPCKWLTMF LKGCWGKIAN MNHLDSCFPL RYIIGRKKAS KLLCTMDSGL KSDSHEVERS  60
   61 NFQLNKPEKS LKRYALLSFY VIILLAIPVW WKTTHYERSS LPFEDMENAP STVQTHLRFS 120
  121 PTFRILDDKG NNLTKEVQKV LEAEPQIYSY NLKVLEDDPV DYRIVLREST DLQWFWDENN 180
  181 FIIDTPSKGP SELAILIVNC LWEAFSPQVM EVWSKFTRFS STVEPSRAET KRTVQFSPQY 240
  241 RVLLSLLVGE GNHEPINWDI ENAIQKYFNP LIEQLASLAK LNIETQIQYF VEDAEAYIKD 300
  301 DKFCTKHADL PNLVNNFEKY LSFSPHIREP TIHFVLYVPS PQIQPLWLEN EDSNIIPTNS 360
  361 MLLPQWGSIT TINFNVTEKK LLHDVDLKDY FRVISRDLLL LLGINDVPVS SLSATLADRL 420
  421 LRQRIAESCI EASDTLQNLA KLVHSMQSMA VPKEIQMYVK DTLLSLDMAY KALSQNNLNE 480
  481 ALSYSNNAFS KSQEALFHPS MVTTIYFPDE SKYGIYAPLF APILIPLLIS FIKEVKDMLR 540
  541 ERKLHRVANV PKPN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle