YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	meu22
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	68	0.98
Transmembrane Helix	69	89	0.93
Non-Cytoplasmic	90	95	0.81
Transmembrane Helix	96	120	0.82
Cytoplasmic	121	137	0.71
Transmembrane Helix	138	157	0.78
Non-Cytoplasmic	158	173	0.68
Transmembrane Helix	174	194	0.91
Cytoplasmic	195	203	0.90
Transmembrane Helix	204	227	0.89
Non-Cytoplasmic	228	248	0.95
Transmembrane Helix	249	272	0.88
Cytoplasmic	273	290	0.92
Transmembrane Helix	291	311	0.92
Non-Cytoplasmic	312	344	0.78
Transmembrane Helix	345	365	0.72
Cytoplasmic	366	388	0.89
Transmembrane Helix	389	408	0.93
Non-Cytoplasmic	409	416	0.74
Transmembrane Helix	417	440	0.93
Cytoplasmic	441	460	0.92
Transmembrane Helix	461	483	0.92
Non-Cytoplasmic	484	497	0.90
Transmembrane Helix	498	518	0.94
Cytoplasmic	519	574	0.99

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSKFYEDID SKLENAMLSQ IESSTITCDG KSLNTLPTPK QEDVEFGVPL QPEDTQDLQR  60
   61 KLKPRHMQMI AIGGCVGTGL FVGSGNALAD GGPASILIAF AVIGTYVLFT TSALAELSAI 120
  121 YPVSGSFYTY FSKFIDPAWG FAVGIQYWLS FAVTVPLELT VAPLIINFWN ASGPVSIWIS 180
  181 VFYVIIIAIN IWGTEGYGEV EFFLSIMKVI SVIGFVILSI IIAAGGVPTD DRGVIGVSYW 240
  241 KQPLVFNNGF KGLCAVSVIA IFSLSGTELV GLAASEAKNP QKTVPAAVKQ IFWRIFLFYI 300
  301 VALFMLTLVV PSDLPGLRTS DNSNVLISPF VIAIQLANIR ALPSIMNVVI LLSTLSVGNS 360
  361 ASYAASRALF ALAKNGYAPK IFNKTNKRGH PIYAIAVTLL FGSIAYFTEA GVGGALFGWL 420
  421 LSICGLSTTF IWGSICLAHI QFRRAWKIQN RKLEDLPYRS IFGVYGSIYG VAMTILALIA 480
  481 QFYVAVFPIG KKPNPVDFFQ AYMAAPILII SFVAWKFFRR TSFVRIEKID LSEGAHGEQK 540
  541 QNLEPVINIP VEEIDFPMKV ATKESMKNVE KNAL