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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: mac1
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRNTLAFLA ILFLLIPTAL LIIGSVSVPS TRMTLAKVEG TEFGIFGTCT GNGTDCTETS  60
   61 FGYNASSSLI DDFYYKGDKR LVLSKVLITH IISAFLSFLS AIFVFFSIFL VNQAVNIINI 120
  121 IVVFITTLLT CLAFAIELVL FLPHNTWQSY VTAGAIGSDL IAILALCLRS VSISRIGQKS 180
  181 ARLEHVDTMN SSYSSYKTDV KYPLALDDKL SSVPTLPKFH DALTSTSEFG PPSDSGDTVG 240
  241 TTQYPGDIKY ATGYESTVAS PVPSRVAKLS SRDTPSIIAD YDEFRKSESS PSRSSVLSTS 300
  301 KPEVHETEGY CPHKTGNRPG FPSLNIPRTR PTTAGIANTQ FDLEPYRNRQ AGSISSEGTD 360
  361 SRFFDVENQV SVAQTPSVKP EMFPKTARPF AAIHANASST QLRNTENITH PGIPNHFAKT 420
  421 TSSVFDEPPA TRMPQTRSPV NDHSSFPSDL PIKGEMSTNM TGAPRVGSRN NSSNDLHAQA 480
  481 GMLKNVGNGP RNAPRNNSSN NLHAQGGMPM NMRGPRGAPR NNSSGDLHIQ SGMPMNGRNG 540
  541 PRDTSRNNSS SDLYAQSGMH PNMNNGHRGA PRNNSSNDLH AHGGMPVNMR GPRNTSRNNS 600
  601 SSEFNAQIPM NLRNGPRNAS RSNSSTDLFG QSGIPGNSRG MPTSPNSRNN SALDLSMHGI 660
  661 PLANNSRQFK RPSYGNMSRP SFELNGSRNP SHGSLNTAHA GMGYGPRSMM RDPQNLSNVP 720
  721 PVSNTLDQLS GNADFELPVR GNRNNRRGPG GNRMIR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle