YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	kms2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEYIPFDDI VRQYDPDYTG KVSIQAFLEI VDDVDALRLN PEAPLLDNEQ RQSAQDFIKD  60
   61 NSEIVVSTSE IKNLFYELTG LDPDTLPVNK LALRENGVLP RKSVAKPQKI SENRIKRKDM 120
  121 FYQDASYITP RKGSPLSHST PLSMFRTKNE YGSNKGFSHI NKENADDSLI QQLYERIELQ 180
  181 AAELRSKDEQ VKELNARNAK LLEELDSSEE ACKSCYTQAK TWEKKFREAL RDSKEYAAQL 240
  241 QTIHEEYEQQ QAHIVRMEEL IHAVEKERKT ETDYMKKESL SEQKERGAFM ESNMILEEKV 300
  301 AHLQLENEQL RLFFKEKAPQ PFQNHPPYQN LKITFPSPFF HIPYIPKTET LNDSQFAAGL 360
  361 SLLASELESQ KNLLKKFENL KKKSSKDFLS PSTILSNAFS KVSLPNSLIL RVLFFSLLFI 420
  421 IGIHIFYFLF FHVATIQQWP FLFWLPSTKF DNRWSPT

Type	Start	End	Confidence
Non-Cytoplasmic	1	408	0.50
Transmembrane Helix	409	434	0.84
Cytoplasmic	435	457	0.47