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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ish1
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSRSVASLG VLLAIVFYIF TYGFSTYRKN DTSAVKTWLE EHSIPYGSRS SPSDFQQFIS  60
   61 ESYDSLVPNL DKWSGHNLNS WLGKKTESSY LDAISNKIRK TGRKLSGSVE DARDATQEAW 120
  121 ESQKASLFES WSDSQLRAFL ARHSPQFAAK EKKGILEKLS PASLRETAAK EYDALTSKLG 180
  181 NTGDWIYDTW SDNELRTWLH DVGVPISSHE STRSHLLRKL KNYISTKADE AQPSVEAVKG 240
  241 KASEKAKQAG EFVSDKAGDA KELVNEKSSE AGQYAGQKME EGGELLQEIS KRRGRFGNWW 300
  301 ANSGLKAYFD AHGIPAYQPS PIDQFYAHLR RQYYLKTNGY QALKSKAYEE ASNVADSASS 360
  361 IASNVASGAT EAYQGAASGA SRFTEGAKTA AESVTSAFEH NKDTATSKAK QMKGKAASLG 420
  421 STASEKVGEA ADYAAETASK VASKAASKVR ETIDETIIER WQDSKLKEFL FLRGVPVPQR 480
  481 STKDQLLDLV RKHFNKGAVP NWAAYFDTLS SKELSAWIKE YKKHYHGKLH PSKDREHLFQ 540
  541 NACNIYRAIA EKADKSVLQS IQSKFPKATV PGYDSWSNED LKSALKEYGD SIGKVFNRKD 600
  601 AIERLKRHDI LFYGPVVADK AKSGVSGFLR RVASFMGFGT RDVAEIKLGE NIQKVKDTAS 660
  661 KASSAVSSAG DYVETNVKKA QRVL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle