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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GPI1_SCHPO
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTTMNIAS APIEVKRIYW PKSTISYTDS GYLVGWKYST NDLIVVTTIT SYQSFANFLV  60
   61 DYCKNQDQSV DIKSLCILGT FNCSADILPG DKYEIDCWIK VQQSTELSHP RVFDSASTPL 120
  121 KINLHIIYYH PPQPRKMQFL SLEPLSLLLL KDSFINKSNP EYESMQHQQI LLKKLKLHFP 180
  181 RRKENSWKRS LRSGLIELLN QSFEVRMLTH ENNNKKNSYV FRLFDRVSSS TFYFFNSLFA 240
  241 YFIILLRIIN EVILLAINYR PIPLSYNMMD IFVSARQVDL RLQQACFWPV QYMKLWVFRK 300
  301 SKRVAIEDYK EYIRFYNNLW LVANDMIFGI TMSSFILENL HLVVKLIENI TFEYAIKNVR 360
  361 SMVIWLVDTP AGLKLNNDIC KFIMKLSVWV IDVWSNFLLH CLPWTPFLVQ VVAISGFGGA 420
  421 SLMIALISDF LSVMTIHIHL LYLASSRLYN WQLRVIYSLL QLFRGKKRNV LRNRIDSYEY 480
  481 DLDQLLLGTI LFTVLIFFLP TIYVFYAAFA LTRVSVMTCL AICETMLAFL NHFPLFVTML 540
  541 RIKDPYRIPS GLNFEIVSFE PLKQDGFATL YLNCNSKPMS LGSMFEHYRK LARRLISHYL 600
  601 SKTTLISLLV GCPVPAIPAE QLYNIQYAML PTKRISIRKL RDLLFHQKKF PYD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle