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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cut11
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMLRTSFPS GSRTKAVRYH TLLRPILQQR FLRACFALLC LCCITSYWFS SGPFISLSFW  60
   61 FLSLVRGFVC FFFMFPYFVM LKSRMSTQKV TKQSLGAQLF YDFSPKSFFL VYLTFAVSVS 120
  121 CLCLFYIKGH ASSIRLQWIA SPNAYELPSL NERFVYMTYF SHILILALTV EHLYLQRDSP 180
  181 SRPVINVSFF NYIFQNLGWL IRFSFRKSII CCLFTPFSYA ILRSYIWRFA ALLTSCCRRI 240
  241 AYTKTPPKWP LSLRLLLHSF WMAFIVCLTF QIALLIFRVF LYSGPMIRGK LLSARSNDPN 300
  301 GTLVDGMKTK KKPLTECIAT EELWFIAKRD PQRIKSIFQD IDRSVSIWQE LYSITESRCK 360
  361 ELATSLKILQ STGDFSAATS KKSGLTKKTN IPYSPNSNHE EINSIPLRNK NIFVPPSQGH 420
  421 SPLLEKIKKQ GSLPSTTPVN EGGISDIIPK SLYDQVIRFI STFYKAPVFG IFRKTLRRQN 480
  481 EALLPNPWLF CVTVNSLTQL VLKSLKYDTY GVVARDISSI LAVYCDTFDV LVSYKRSLVK 540
  541 NHSNSTNLDD DFKNLNSAAN ALHCGIIDIT EKFQDFFTQL NLSPRIERRC WVLFREYKSN 600
  601 S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle