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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: aah3
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGVYFVLLF LSSALIHVAN AGSNAEWRKR IIYQILTDRF AVDDGSTDNP CDPDANQYCG  60
   61 GTWKGIENKL DYIEDMGFNA IWISPIDKNI EGDIDGAGYA YHGYWNTDYE SLNEHFGTED 120
  121 DLVSLITAAH KAGIWVMLDS IVNSMALAPP LADADYSSLN PFNKESYFHP YCLIDWDITD 180
  181 NETNVMDCWQ DSGVLLADLD VESSDVSSYL SDHFKSLISK YDFDGLRIDA VKMMNYTFFP 240
  241 DFVDATGVYS VGEVFSYDPD TMCSYMSVLP GVTNYFLQLY INFSFTATGA GFTLIPTYQE 300
  301 VMASNCSKYD STLMLTFIEN HDLYRFPYYT SDQSQIMGAL SFVLIWDGIP SIFYGQEQGF 360
  361 NGGEDPANRP ALWLTDYDQS NPYYTVIKTM VAFRKFVITQ DPDWVTSTYQ SIESAVDHYV 420
  421 GQKNDVLVMF NNMGVTNNLT IYEVETNYTA NEVVSDVFGH RTLTVGADKT LTASMTNGYP 480
  481 LIMYPHSKMS GFTLPTVNRT VMPSTSATAT TTVYTSYYSP SYSARSFTGT GSIFTISSSS 540
  541 RLILSFKTLV FGLGVTAMLF VLFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle