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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AMY2_SCHPO
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.68
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYRRNICLR IGWMLLFAFI PAYAGHSAEE WKRRSIYQII TDRFSLEEGA TERIPCDPVR  60
   61 FMYCGGTWNG IRNHLDYIQG MGFDAIWISP IFENVEGNDI DGSSYHGYWT TNLYELNHHF 120
  121 GTKEEFMELI QELHKRDIWI LLDVAINSMA INGPLEQMSF EKVIPFNDAS FFHPHCWVDY 180
  181 ESNDIESVQN CWLGDENLLL ADVDTENEVV LSVLEKWIKN VVQEYDIDGI RFDAIKHAPI 240
  241 EFWLRMSKAA DIFTIGEYFT GSPAEACDYQ NSGLDSFLNF PLYWPITWAF NNTGLQCEAL 300
  301 AIAINQINEE CNDINVLGTF IGNHDLPRIS HNNTDQARIM NAITFVMMWD GIPIIYYGTE 360
  361 QNFNSYHDPF NREALWLSNF DMENVYYKLI GILNRFRKSV QRQEENYVNT RSTILSVKIH 420
  421 HIVVQKLNVI TVLNNYGIHN EERLSIVFKP LGASPKDTFF DIINNQKYVV NTDGTLKVVI 480
  481 TNGFPIVLYP TSKIETSLPQ FTATLLPEIT FVPSITVTTH YVLPTLLAPL GYDIREHPGG 540
  541 QQFWNTLTAK SEAKTIRSFT KLKLFILLIA VPFALPMIIL I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle