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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC24C9.06c
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSRIFTQST LRSFSCAPVA ANIDAKKVAM SNFEKNKFIN YQRIKDNLEI VKKRLNRPLT  60
   61 YSEKILYGHL DDPVNQDIER GVSYLKLRPD RVACQDATAQ MAILQFMSAG MPEVAVPVTV 120
  121 HCDHLIEAYE GGPIDLERAN VTNKEVYDFL QTACAKYNIG FWRPGSGIIH QIVLENYAFP 180
  181 GGLLIGTDSH TPNAGGLGMV AIGVGGADAV DVMANLPWEL KCPKVIGVKL TGQLKGWTSP 240
  241 KDVILKVAGI LTVKGGTGAI VEYFGPGVES LSCTGMGTIC NMGAEIGATT SIFPFNPRMS 300
  301 EYLRATNRSA IADYAEEFAP IIAADENAHY DQIIEIDLNT LEPHLNGPFT PDLATPISKF 360
  361 KEAVKKNDWP QELKVGLIGS CTNSSYEDMS RAASICQQAI DKGIKTKSLF TITPGSEQVR 420
  421 ATLTRDGQLD TMRKAGGIVL ANACGPCIGQ WKRTDVKKGE KNSIVTSYNR NFTGRNDANP 480
  481 ATHAFVTSPD IVTAMVFSGD MNFNPLTDTL KDKDGNDFKF EPPTGAGLPS KGYDPGSNTY 540
  541 VAPSSVNVKD VAIDPHSKRL QRLTPFKKWD GKDMKGLKIL IKAKGKCTTD HISAAGPWLK 600
  601 YRGHLQNISN NYMIGAINAE NGEANKLKDQ LTGEYKTVPN VAIDYRDHGI RWVTLGEQNF 660
  661 GEGSSREHAA LEPRYLGGAA VITKSFARIH ETNLKKQGLL PLTFADPAAY DKISPFDTVD 720
  721 IDGLTTFAPG KPLTLVVHPA DGSAEWSTKL NHTFNKDQIE WFKAGSALNH MANMHKQK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle