YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	inx6-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYAAVKPLSN YLRLKTVRIY DPIFTLHSKC TIVILLTCTF LLSAKQYFGE PILCLSSERQ  60
   61 ADYVQSYCWT MGTYILPAEV DRDGGSSWEY ALYAPTSTAA ETFNVSSLRA LVAQNEQYAR 120
  121 FISIAEGVGP ETRGVTKRMY LRYYQWVFMI LLFQSLLFYF PSFLWKVWEG QRMEQLCCEV 180
  181 GDALIVEATY RTRLQMLTRY FRAQFAPIHW CYSIKYAFCE LLNVFISILN FWLMDVVFNG 240
  241 FWYKYIHALA AIPVYDWNLW NLMTSRVFPK VAKCEMFVYG PSGTPNIMDI LCVLPLNILN 300
  301 EKIFAVLYVW FLFIALLAIM NILYRLLVIC CPELRLQLLR THLNGMPKSH VREVLASAGY 360
  361 GDWFVLMCVS INVNPTLFRE LLEQLYAKLN QARCTEPVFA EQPCQQVPQL AQVPQLFSHA 420
  421 KLDRCPSRNC SLLIDPTADR HSICTESSHR VTAMPTAPTL NLMAPNDEII SMDRFFHESH 480
  481 A

Type	Start	End	Confidence
Cytoplasmic	1	142	0.69
Transmembrane Helix	143	163	0.91
Non-Cytoplasmic	164	211	0.62
Transmembrane Helix	212	234	0.70
Cytoplasmic	235	240	0.35
Transmembrane Helix	241	259	0.71
Non-Cytoplasmic	260	305	0.42
Transmembrane Helix	306	328	0.91
Cytoplasmic	329	481	0.57