YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: dome-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAQEQLVLL LMLLAGCRGG ANAILDPGWV IPSKVEQLIG GDFNLSCTLN EDYFNGKSAE  60
   61 DCPVEKLYFT GGGRVYRDSK HIRILNNTTI LFSDTNAVEQ ENDYHCMCDE YVINKSKVYV 120
  121 GTRPLLVRDF NCLDYDFQFM VCNFTQPPNT VITKYNISYN TNNDWRYSNT LDCNFDSAPV 180
  181 VTCNLTDDNY KRFSETFYFR LSISNALGHE TQPITINHFE RLVPARPGQN LTLLNRTESS 240
  241 VCLSWEMPRR SNYNRGLVWQ VRVTPQNFEP ITRPSWRNHT LTIKDTLCLT ELPFAGYNYT 300
  301 LRVRVRANQN NTLWSEPMIY AFATAPAPPR RPPRVTYGSF YVYSSEKAMR FYWEPLEEHE 360
  361 LNGPDFRYSI SEYRINGTAV DPGLIKVESN SAMIDHWSMS AVHHFLIRSS NSQGLSVNAT 420
  421 PMTIGPISNR DFKVREPRNI RSVYHPTNKS YTLSWDPPSD QRELQNYTVF WCVPKPGLQS 480
  481 ECEGSIRFAE VASGLHHFTT SPDQLLTLHM AVSANYQSHN TGLHWAICSS DKKDDLAKME 540
  541 PSIDVATSTS LTVSWSERVC AVILAGYNLT YCQRSAGRPD NCTTVTIDRY TNKHVIQNLV 600
  601 PYTDYSVKML MYSDSRVSKY SDELVNRTGE AAPSQPRELQ LIRVTSDSVE LAWKPPLLAN 660
  661 GVVRAYEGTF RSLHDNVTDT FRVSASADEL VNNEKPITYR LGNLTAFTKY EISVRARTVY 720
  721 PSEPSNVILF STAIGVPSPP QLYVINNPDQ SSRLDWEPPR TPAGRIDFYE ISLRDNNASC 780
  781 LTSTILPGRN LSYVMATPRC TSHNPFQLAV RAINVEQHPQ LNGADAAEGA VLLMSTNGKG 840
  841 CEARTDALGE EERLQFEAYA ANMTAYRLYR SDWGIYGFIC TPDTHSVKAM YQTIEVTVAI 900
  901 LVLGVIFYLV YKKYRKMSDI GLVLPQGIME TMKKPIDMGG LGLGLGPDSS VSGGIVCTRV 960
  961 DDSPPYTPQD LPHDFSSCGS ESSKLLLRTA SSSGGGGCVD RDGYDDNHET GPISAVGPPT1020
 1021 SYLAMRHGLL VQNDRERERE RDREQERERE QQQQQRESEM DREQSCTNGY IKPTQMKSWG1080
 1081 GNGPSDNDHT FSVPSTAMTA PMSQPLSQIP LSGYVPVPIP QSRFNPAPVQ PFGSPAVPSA1140
 1141 ATAAAASTFF PPAHLLNMDN YVQASDLHKL KPLVAAPLSQ TGGPAFAGSS PATSPPLQLP1200
 1201 PVHAASPAAA TPKMADIGYT TMEQLQLTGL IKPPLAATVG SPTHAAGGAP GGGNQHSRLQ1260
 1261 PQINGYVTPQ DLNAMAHNRH VL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle