YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Mur18B-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTTTSPRET TQTTFTVRKM TGRRMSKLST VLLFCAALLL TKSCGILALS GDGLPQSQDV  60
   61 GQAELWSDDA TTTIISPSEE NSGSGGWELT TEADTTIPSE ETTAGNEETT VSEEETSTDA 120
  121 SGDVETTTAA PETSPADQES SSAPEETTSA PEETTSAPEE TTSAPEESSS APEESSSAPE 180
  181 ETTSAPEESS SAPEESSSAP EETTSAPEES SSAPDQTSSA PNESSAPPEE TSSAPEQTSS 240
  241 APEETSSAPA EPESSSTSSA ASPSTPAGTT IAPTPPTFKC QTAGLFPHIS GDCSRYHNCL 300
  301 LNPVLRQLQD IELTCPELTV FSPSLGRCVR DLAECQVESF PCLSVGRFAG IDETYYYSCV 360
  361 ASLQGGFHKF IVRCSSGQRF EPLIGGCWRY DWTQIVPGQE ATEISDLAAI KRELKLYKAE 420
  421 AKLRLKAQKE QEKLAKKQQK LEEKAAKKAA KEQAKQQAKA EKDKAKAEAK GESIESAESA 480
  481 E

Type	Start	End	Confidence
Signal Peptide	1	48	0.94
N-region	1	39
H-region	40	45
C-region	46	48
Cleavage Site	48	49
Non-Cytoplasmic	49	481	0.99