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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24643132, gi|...
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPLSPLRSC LPRLSSRLHQ LSSNIHCFNR CYARMFAVVI LCVLFCTIYV PFRHKINMAD  60
   61 LTCSFPDASP MRLLPFSITN CTYAYIETPK TKTTVLDATE STSSSTALAA AASSAVCPWD 120
  121 DPAESVPPPP PPAQVKLSVC PWELDSATET PTAAPAVGSG GGGAGASKIL SSTGQPMRLN 180
  181 STSSDNSDVN DRMQRNLGIR HQNTVDSGEA GIKRLIPNIP EQRRASVSFT PSPTPDFQLG 240
  241 RTPTTTSSPT VAPSSSTPLQ ARSAVYGSGQ GIAKDPPSGS DVDAELEEEL NKISLGESSI 300
  301 SEPPLLVVPT PEQTPPPITK ITPPPGESEN QADQVIDSTE IPGSSCSTQA NQFGEATATV 360
  361 TTVKEVQIEL IEQVSGVQTE PDSPPTIKVL VLEATTPVSA ETATADPGEN LAKMATASNT 420
  421 TTITTDDQAM RADDDAERAA EIEQTVLDEL SPTTDEYQEF GDAKDAVDDF DSIDIGYIPP 480
  481 APTPAPSMAP LAELDVDTVD DEPCEPAAPP PSHSAPASSS SRELVMASGS VTATPTSSNE 540
  541 EARKRRKKRN SEGKKLSSQD DKDKDAHERA GGSSMDAADH NAVCPWEDEN VSTNDGTFVK 600
  601 TYATLGYL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle