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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: B-H2-PA
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTMPPEMSA TTAAPVGSAP SATAHHPAAV GGGMPRPASP AVGSNTTTAT ATTATRSRFM  60
   61 ITDILAGAAA ASAAAAAAAA ALAAASSGGG RGSPTDSERE QSLVAQHHHH HQQQQQHHHH 120
  121 QQQQQQQQHQ QAALQQYIVQ QQQLLRFERE REREREREHY RERHSPPGNN PYAHHPMPPH 180
  181 LLAHFPPAHY AVLQQQQQQQ QQQQHPHPHH LQLERERLEA LHRHGHGLTG DPAQHLSHLS 240
  241 HLSHQQHHPH LHHPMHDERS RSPLMLQQLG GNGGNNNNNN NNSSSASNNN NNNNNSASAN 300
  301 SNIISGNSSS SNNNNGSGNG NMLLGGPGSS ISGDQASTID DSDSDDCGGK DDDGDDSMKN 360
  361 GSSANGDSSS HLSLSLSKKQ RKARTAFTDH QLQTLEKSFE RQKYLSVQDR MELANKLELS 420
  421 DCQVKTWYQN RRTKWKRQTA VGLELLAEAG NYAAFQRLYG GATPYLSAWP YAAAAAAQSP 480
  481 HGATPSAIDI YYRQAAAAAA MQKPSLPASY RMYQSSIPPG MSLPGMPAPP PPGAAPMLSG 540
  541 YYAAAAAAAA SAGAQQQQQQ PPAASRSPAT SQSANSEADC ERTSSSSRQR LITPSPPLNP 600
  601 GSPPHRERIN EEEDRERDEE RDIERERERE RERDEDDEEE LALEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle