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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG8945-PC
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTGLPVVLL IVVMVVDVVH RTGAIDFGYH PSAEESDSLV RQSWGRDLLQ RRVQDRRFVP  60
   61 RYQHQTSIRF EPPELDFQLF DEDQDQAPSQ PYVFESVEES QPGSTIFDQF HVQSELLEIK 120
  121 EPNPSRKPQT KPQSAGNGTT FPIYFTHPTT GIVYAISQVG VGHNPNGIPT QSRNDSNAIA 180
  181 IYVTKAQYDA DMESLRRQYE QQCLPIPPGT VISTLNPVHH GGTTARPQII RLKKPKNPIT 240
  241 KPSNKLPKPN YRPPPVMVTS GPIDHVSDQL LKLPHRTGST TRSTTTTTST TSRPNTRRKK 300
  301 RKKIPKNKTK VIKKRPGYGA NNTRGPQGSL PIILGKRPST TTTTTTSRPP PAYTQLEKPH 360
  361 MPQATLPTSN VFSQHLLRSD LEPAEESETL EEQEPLQSDE QLNLRIRRSV EDVRREKRRG 420
  421 PLHAKKRNSS LKALIKKSVL KNAVKRARLL KNQGEMDSSR TQHRRSRRSL YSIKNGEIEK 480
  481 SIKTEKATKV PSEEAEKEVT ADSTKRSQKV VSKESKTILS RGNPNVVAAR RVSTPKRRSP 540
  541 KGSSGRRKTK QQTPPSTQKK EKNSGGVLHI PTALHLLHRN HSQDEVPKVP LNANQKKKRK 600
  601 VKERKRGRPQ LPSFDIFELM SDGDYEDEGE EEEEEQDDDE DYYFEDEHKD EDKNKPNESS 660
  661 STEVGQSDLK EDSSSAEEGA DFGAMVEEET TTTATISSSE ELDATSSTKN SMAKKKIRIK 720
  721 RRPVDSDEDY DDDEDSGIAG FFRMIFYPVQ VAMSRLMDGF GTPDEEEDKE PATQPVSKYP 780
  781 SYTLYHSAHS NEAYAEPDDE DSEDDEDSSS LGSWFGSWFG LQRRTKKIGS TTTTMPVPLP 840
  841 PPTKAPPSWL ESWFGFGSTT EADAEDDYDK WFSSWFDSRP KRKFRRRSTT STSTTSTTTT 900
  901 THTPSAAAAQ VPILTIVDPL RNPQNWIGIL AHHIVNSTGS AISTSTSNPL LQALATRMTT 960
  961 RGTTSTTTTT SRPDVPRRIS YDKYQIWRLK PQDEEQVRAL EEFKKGEDGV KLQWLKGPSL1020
 1021 RGLTDVLVPP KMLVDFQGTL NYEGIAHEVL IFDVGKAIAY ELTKEDYLQT TRPSKPRPTA1080
 1081 PPPMTWNRYH NHDEIVKYLE TVRMRHPQLV ELIHIGRSFE GRPLIVVKIE SKQTAAAANN1140
 1141 DGLHTIKRPK RKRKSGQANA VFVEAGAQGL AWIGPAAATW MIAELLRLMK TNKSNEDVEF1200
 1201 IRNTTWYIMP VLNPDGYAYS HEYDRFWKKS RSQHQTPPPS GLLDSAMTWL QQKRGPDKVC1260
 1261 YGVDLDRNWL YHWGKRGSSK APCNEFYAGP APFSEPETKA VSEFLMDYRT QIKLYISLQA1320
 1321 YGQVISYPVK ANSTFNSERL DDFLDVAMVG TDGLRKKGSK SRYKVDASND LIEQRSGCAD1380
 1381 AFAAYEIGIP FSYTLQLADN GVHGYLLPSS AIEPTARDAF EIISGMLDYI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle