YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG9104-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSHTNETAA TSTTAGAVTN GAGGSGAGAA GAHGSTEGKI RCIFLSEFHA TAGCKISCQV  60
   61 PDNYISKDVF DAINVYIIPK QHLQRCILTV NAMDVKIVGY PVGIQDQQKY ARNAFLFNLC 120
  121 FVCDSRARSV QYEPVVKKLS EYLIMMEEES CFLSREDDKR RLQNIFETVL RDLNERKVAT 180
  181 IVEGDNTIYL KIVMHKPDPP PVKDHMVPLL LANLRDAPLD NWDLTTQQIL PYINGINHVA 240
  241 RIAAEADVET DLVKSCIQNL VYYGVVQLLP ILKYSNVYMT QNLKHLIQSA SLSGACRKYV 300
  301 ALRPDKTLPS VQRIFQFYAS MTHGVTLRAI CQRLCPQHHN IDERRMVIFG LQHRFIRCIH 360
  361 KYPVFTGSVP SGRQKMYTGL ISFDEICCKT GLSPCTIERD IEKDTNVTVI WK

Type	Start	End	Confidence
Signal Peptide	1	29	0.60
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	412	0.99