YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG9911-PA, CG991...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGARIGIGK LGPCVALVAI LQLLQYTQPA DAAGAVPMTS DNIDMTLASN ELVFLNFYAE  60
   61 WCRFSNILAP IFAEAADKIK EEFPEAGKVV LGKVDCDKET AIASRFHINK YPTLKIVRNG 120
  121 QLSKREYRGQ RSAEAFLEFV KKQLEDPIQE FKSLKDLENL DSKKRLILGY FDRRDQPEYD 180
  181 IFRKVATNLK EDCQFHVGFG DAAQAMHPPG TPIIVFRPDV ALSHENDETY TGSLQNFDEL 240
  241 KIWVQEKCVP LVREITFENA EELTEEGLPF LILFHHPTDH NSIKDYKSII ERQLLDEKQN 300
  301 VNFLTADGKR FAHPLHHLGK SEDDLPLIAI DSFKHMYLFP HFSDMYSPGK LKQFLQDLYS 360
  361 GKLHREFHYG PDPSNDIEPD PHTGKGTSPP ESKFKELGPS KHRYTLLEKD EL

Type	Start	End	Confidence
Signal Peptide	1	32	0.98
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	412	0.99