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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15291287
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLHHPYAL ALSDDNIYWT DWKSKALHMT ERRNISAKRD IITNIDGLMD IKIIYQNQNQ  60
   61 STMKNACGNN NGNCSHLCLR NPSGYSCQCP IGLRLRQNST TQCQNLPEDY LLIALRSGIG 120
  121 MISLNSGDFM DVVLPINGVH GAVVLDYHYR KNLLFFADVN LDVIRRVNLL NLTESKVIVG 180
  181 TDVLTPNGIA VDWIADNLYW SDTDRKLIEV SRLDGSCRKR IVEDNLGDPR SLIVHPKKAY 240
  241 LFWSDWSSPA KIERSYLDGS NRTVIITSGI GFPTGLTIDF TNRRLLWADA LEDNIGQVDF 300
  301 NGKRRQTIVP YAPHPFGLTL FENSIFWTDW YNKSVYRSQK LARSGYGNPF EVRDALSGAL 360
  361 DIRAVSLSRQ PKSVNHCAQD NGGCTHLCLN RNVDYVCACP DVMDPKDVAC SIKPKVLVHA 420
  421 NLENDQLLEY SDESTDDSTP PELLGESNDH GDDGHTKKSD QEREFFVLVA LGVVIVMVVI 480
  481 IILVIFMLAF NTSKKKNKRN SRGSSRSVLT FSNPNYNVDG TPMEPKTNIW KRFKYDKTHQ 540
  541 ERAGVYEERS LTTETASSSL FVPTPSPMAS PSTKTIQLTT LSTIT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle