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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG8909-PB
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLTAFPFWP LVCFVWLCLG LGDLTKTAVK RNAPHYGIHP TNALGRWDWN KHKQLHSDAR  60
   61 IGHLEAGNES REDQLSEELS KFGEKLFPVS NYPPYQQNNE DSQEVHHSGE GRLHTMESSV 120
  121 PSKTRISGGT NSNDTPKFRN IGAQRGRTEI AGIRETDRIS SRGRDGFIGG PSNKQKPFRV 180
  181 NLAVLVQDDP SQPGETYSNC QNSNESDENC NPEEDAVPNL QRDCEKTGIH VMCPRTFRCI 240
  241 SKYWLCDGDD DCGDYSDETH CGARTNCTDD QFECLNGFCI PRTWVCDGEN DCKDFSDETH 300
  301 CNRTTCTDEH FTCNDGYCIS LAFRCDGEHD CNDNSDELKC AAVINSCPEG EFKCRGGLGG 360
  361 AGGPSGQCIL NRFRCDGDND CGDWSDEENC PQKPSLCTSN EYKCADGTCI PKRWKCDKEQ 420
  421 DCDGGEDEND CGSLGSEHPL TCGSDEFTCN NGRCILKTWL CDGYPDCAAG EDEVECHLQC 480
  481 DLGQFLCPTK QNLTNLKICV HQKHICDGHN ECPAGEDEAD CPKERKCSEP SPCEQLCIET 540
  541 TAGSNECACR LGYVMDKNKV NCTDIDECQY LTSPVCSQKC HNTMGSFKCS CETGYILRPD 600
  601 LRSCKALGGA MTLLVANRWD IRRVTLSNNR YSAIVKGLHN AIALDFHHRK GLMFWSDVST 660
  661 DVIKMVYMNG TRVRDVIKWG LESPGGIAVD WIHDLLFWTD SGTRRVEVSN FQGNLRTVIA 720
  721 SYDLDKPRAI VVHPGEALAF WSDWGPNPKI ERAYMDGTQR KVIISKGVTW PNGLAIDFPN 780
  781 SKIYWADAKQ HAIECSNLDG SDRNKILSTH LPHPFALTLF EDTMYWTDWN TKTVSAADKI 840
  841 TGKEFRAVHE NFHFPMDIHA YHPARQPEYA DRCQKDRRGL RGGCSHLCLP NKTSRRCGCP 900
  901 IGLSLKEDGK TCKSTADKLV LVARRKDIRL RHLRDNQADP NDVDMIVPLD NLKHAVALDW 960
  961 CSDTDFIYWT DVERSTINKA HLNGSYQQRV VHSNLVSPVG LALDWITDKL YWTDPSTNRI1020
 1021 EVATTNGKMR TLLIWEKLYK PRDIVVNPIE GFMFWSDWGD DPMIERANMD GHERVTITSK1080
 1081 KLIYPNGLAI DYEKSKIYFV DGGTKTLENM NFDGSGRQVI LNGLGHPFGL DVNEGRVFWT1140
 1141 DWDTKSVMSA NKLTGKDTNV IIANSTDLMD IRVFHRTRRR IFNACDKLNG GCSHLCLLNP1200
 1201 TSYTCACTVG VQLKEDRHTC SEGPTQYILF AHRIDIRQIS LDFDHLIDVV LPLPPISNAV1260
 1261 ALDVDRKTGY IYWSDTIENV IMSSSPDGLH VQKIVGDSLE NPDGLVVDSI GRTIYWADAG1320
 1321 RHTIEVASLD GSNRHVIAYK DLESPRGLAL DYEAGLLFWT DWGHYRKIER SHLDGNERSR1380
 1381 IVTANLGWPN GLSLDLKSKR IYWVDARLKT IDSCDYTGNQ RKLIMSSLHH PYALALSDDN1440
 1441 IYWTDWKSKA LHMTERRNIS AKRDIITNID GLMDIKIIYQ NQNQSTMKNA CGNNNGNCSH1500
 1501 LCLRNPSGYS CQCPIGLRLR QNSTTQCQNL PEDYLLIALR SGIGMISLNS GDFMDVVLPI1560
 1561 NGVHGAVVLD YHYRKNLLFF ADVNLDVIRR VNLLNLTESK VIVGTDVLTP NGIAVDWIAD1620
 1621 NLYWSDTDRK LIEVSRLDGS CRKRIVEDNL GDPRSLIVHP KKAYLFWSDW SSPAKIERSY1680
 1681 LDGSNRTVII TSGIGFPTGL TIDFTNRRLL WADALEDNIG QVDFNGKRRQ TIVPYAPHPF1740
 1741 GLTLFENSIF WTDWYNKSVY RSQKLARSGY GNPFEVRDAL SGALDIRAVS LSRQPKSVNH1800
 1801 CAQDNGGCTH LCLNRNVDYV CACPDVMDPK DVACSIKPKV LVHANLENDQ LLEYSDESTD1860
 1861 DSTPPELLGE SNDHGDDGHT KKSDQEREFF VLVALGVVIV MVVIIILVIF MLAFNTSKKK1920
 1921 NKRNSRGSSR SVLTFSNPNY NVDGTPMEPK TNIWKRFKYD KTHQERAGVY EERSLTTETA1980
 1981 SSSLFVPTPS PMASPSTKTI QLTTLSTIT

YRC Informatics Platform - Version 3.0
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