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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: inaE-PD
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGLVVFRRR WSVGSDDLVV PGAFLLTIHF ICFVIVSVSL VIFEYNTRIL SVKLLFYHLI  60
   61 GYLLILFFSI CVEIGICVIS MRGSILDAEA RTSINIWIYL KSLVILFDIA WLAVGSVWLG 120
  121 HYYTTAPIDD PKKVYIAIII CNWALVVITL ITIWCTFDAA GRSWVKMKKY QRSMRETESR 180
  181 FNYKRSNSMN RNWRQRKVMR AYQDSWDHRC RLLFCCMGSS ERNRNSFTDI ARLLSDFFRE 240
  241 LDVVPSDVVA GLVLLRKFQR LEREAIVRQR KNGTYEFLSG VPITERTQFL ALNDAKNYDF 300
  301 FQTVIHYMYF AQGAYGWPMY VIINRSKMWH LVPELKCFGC CCGTSDDTEV IQDNCCLCNY 360
  361 AALKKTLQLG DIDIVYATYH VDVGETPFFV AIDYTHRAVV ISIRGTLSMK DILTDLNAEG 420
  421 EVLPLQPPRD DWLGHKGMVQ AAIYIRNKLQ EENLIERALQ RNPDRQTHTF DLVLVGHSLG 480
  481 AGTAAILAIL LKPEHPTLQC FSYSPPGGLL SMPAVEYSKS FITSVVLGKD VVPRIGLNQM 540
  541 EALRADLINA IQRSVDPKWK TISCSVICCG CGPEPTSVVN MSGQDTHINQ YQEERGTARS 600
  601 TSAHPTDSSI ALTLHQPLYP PGRIIHIVRH HPKPDEQKYD SGWRNVLKNR EPVYQAIWAD 660
  661 STDFDEVLIS PVMLQDHMPD KVLAALKKVV SCRDRTVKAC TTRRRNDNTT ITTTTTVTTT 720
  721 TTTTQNTDTR YSRPPSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle