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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tomosyn-PA, tomo...
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKFTFKGVL DGFRQSVQPQ ATRQEQEIQE QLKADHFTLK KTFRHGFPYS PTSFAFDPVQ  60
   61 KLLAIGDKSG YIRILGRPGV DAHAKHEGES ECAVLFAQFL VNEGALVTVT ADDTIHLWSI 120
  121 RQKTPRIVQS LKFQRERVTC IHLPVGSKWL YVGTEKGNIH VVHIDTFALS GYIINWNKAI 180
  181 EVVRTSHPGA VIALCDNPLD ANKLLIAFEC GLLVLWDLKA KCAELRWQAA EAVKSLAWHY 240
  241 EGKYFVSSHT DGSICSWPTK PQAKPQSQVC PHAKINKDGN AEKCKPIYKV DLKSSATGET 300
  301 FTIFSGGMPS EKGSKSNCIT VMVGKATTVL EMEHAVCDFI TLCENPWPCE TQEPYAIAVL 360
  361 LQYDLVLIDL LTPGFPCFES PYPMDLHESP VTCCTYLTDC PSDLVPAFYS VGRTTTSKKS 420
  421 CFSEREWPIS GGEWSPASCS YSEIVITGHQ DGSLKFWDSG AGTLQILYKL KTAKMFEKPR 480
  481 SHVAHSHPES DNPLAVHLIF LCSESRRLCV AGAMGQVMLF KFRKVESTSE VLVLEIPILY 540
  541 ENFDDIYGTS PECDFLTGHQ VQKAESSDSD KTAECSLKVR NGAQRKPPGF QSQLVCLTTG 600
  601 PNRRNVQVTS LCISSSYGLM AYGTEYGLVI IDIIQKICLL SVACPDLYGA HDPYSRTPKS 660
  661 PKRIENKEEQ SRSPSSDQVN KLDGTFSRSR SSSMSSIDMS SSESVTCLAF IESYAKRNDI 720
  721 LTLVPTLWIG TSFGSILTLF ITMPERDVRK SQPVLITING GPVVRLKGSI TSMSFLDSYG 780
  781 SIIPYTFETW RDEKRDNKDR TPTKSSSRTS PTFTPTTANT LSNTSVAGGA SAGGGAGGGG 840
  841 GAGGGAASGG AAAGGPAGGG AGAGSAAGAA GGVGSGVTSG GGMSSSSASS SGISGSVSTG 900
  901 LETLTDRQYI VIASEKQTKV FDVANQCCIN RIQLSEMDFA VKAETITMKD GSCLATYLSN 960
  961 GHLMVHSLPS LKLLLDTDFL PLMELSFQTK CKQGIVDPML SIWGQQIIVH EDTTQISKIF1020
 1021 CFSHKGHGLY MASPTEIQKF TISSEFCQFI LEMMGELYTV HEMPEQPKEG FFKGLFGGGA1080
 1081 KLLDREELFG EQSGKPNRSV ARHIPGPNLE QLGQRASTAA SEISRAHQLA MERGEKLNLL1140
 1141 EERAERMANT AQDFSGTAHQ LMLKYKDKKW YQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle