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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: fw-PA, FBpp0309601
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.46
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFCCNIPVDA SVATSTSTSI STYPLQRATK RAMTPPNAMA LIMLLLLALC AAGNGQICGP  60
   61 PAVPLNAKVR TITVDSQIAE AHYECDAGYE LFGPSAVKCD RRTGWDRDLP FCGVNVAYRK 120
  121 PVNQSSYTRS GPASYANDGK PGNKNPDGQE CSETQKEPSP WWRVDLLTPQ AVHVVRITTR 180
  181 GCCGHQPLQD LEIRVGNSSA DLQRNPLCAW YPGTLDEGVV KTFTCARPLV GQYVAIQLVG 240
  241 VEGSLSLCEV ETFTNDEFSV DRCLSPKIGV DTVVTTFSKT CYDFHITKGE SFDKAQAICK 300
  301 QTGGDLVHDF RGATSSYILS ELERRKSELK PQLVWIGAQK EPGITSRTWK WVNGDVVQKP 360
  361 TWGKDQPNNY NGEQNCVVLD GGRNWLWNDV GCNLDYLHFI CQHSPLSCGS PDAQQNTTVM 420
  421 GKKFTLGEKI QYTCPKGHSL LGQTERECRL DGTWSGSSPT CKYVDCGSLP ELKFGSIHMS 480
  481 EERTSFGVVA TYSCHENYTL IGNENRTCAM DGWSGKQPEC LVDWCPDPQP IAGGDVRFND 540
  541 KRAGSTATYV CEPGYVLVGE AIISCGLGGE WSSKTPSCRF VDCGAPARPN RGIAILLNGT 600
  601 TTVNSVVKYE CDEDHWLDGQ SELYCTREGK WSGEAPVCEL VTCETPSVPS GSFVIGYDYN 660
  661 VHSKIQYNCD PGHIMHGTPV LECLDSGEWS ADAPYCEYID CGTILPIPYG SHKYVTNTTY 720
  721 VGSEVVFSCS QSHKLSGVLK RTCLESAVWS DASPKCEEIR CPEPKLAAHS LLSVTGNDRM 780
  781 YGRTLIRTSE SSQNTAQTYK IGALAKYRCE RGYKMVGEAL ATCTDSGQWS GTIPECVYVE 840
  841 CGAPEGINNG KVVLATNATY YGAAVLYECN VNFKLNGVSR RLCTEHGNWS HEAPECVEVV 900
  901 CDTPNINENL IVEAGPRAVG SVATFKCAKG RIMMGNDTRV CQKNGKWTGK SPTCRPVDCG 960
  961 RPLAIENGRV IVVNDSTLYG GSAEYHCIPN YNRIGQYLRK CTEDGAWSGK QPRCELATAE1020
 1021 GQETSELGTG VGIGATVIVA LLVIFGLIFL YRNKARPVKN TENVQAAETK DERNAAVMSY1080
 1081 STLEANNRMH MDNNPSATFN TFHGGAGGRS NGGGNPDANS NGERLNNNRS ENIYDQIPNE1140
 1141 QFYDAPYEMR TNDEVYEPEP VASNVITING ISVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle