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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: m-PA
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWSPQKGPTR LWDLRFSSCI FILHLMFSLV IAGNELWPME RPDGMPNIVS LEVMCGKDHM  60
   61 DVHLTFSHPF EGIVSSKGQH SDPRCVYVPP STGKTFFSFR ISYSRCGTKP DLNGQFYENT 120
  121 VVVQYDKDLL EVWDEAKRLR CEWFNDYEKT ASKPPMVIAD LDVIQLDFRG DNVDCWMEIQ 180
  181 HGKGPWAPPV SGIVPLGSTL TLVVAINDYR GEFDMRVKSC VASDGSGHVI NLSDEFGCVL 240
  241 RPKMISRFLK ARAPDERATV ITYAFFHAFK FPDALSVHIK CKVEICRHGC LDHCQNTGVG 300
  301 GGGGGSGESL GLGLGLGLTN ANERKDVHMS DALGSSSNDL LRDLALPPGG QHGMGMGMGP 360
  361 DHDIFYEDII HDHKQTLGGG GMPAGGDYGH EKSVNLQPRP VHEEQEEADL SDLFGDEDLA 420
  421 DLDMEGGEGE RYLGLKKSGK FPHGPRQLEA QKRMGVPMAG PRSLEPHGHG DEDVPRPVYR 480
  481 PQAEALKQPR EDHIDLDKEE EEEKEKEEKT QQEDKLTGEG GAAASNDSSK SRRRRSLVIS 540
  541 DRKVRSADVG VSGLYDVISE ADLAFSPDSK QEAVTVFQGK ISEEVVYGIC MPVPGFSILF 600
  601 IVVISTTIVS ALVAGSLLYR YQLQKEALEK QTPMPVTGTL ASWMTLRLFR LRHMQQQQQQ 660
  661 QQQQQQQQQQ VRQPSSGHET VQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle