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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0298283, CG1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDIYYCSNS QMKKSRDADK SSATLSATNT NANAVNLSAA DKKNNNNNCS NRNKEKSMQA  60
   61 NGKNWKGIVQ SNPNPSGGVG TTAQPPKVFH NTRCTRHHKP HHSHGNGSAA SAVGGAAGLA 120
  121 NGPPMEATQQ RERERERDRD RERERERDRE RDREREREHQ LHMHQHNHGL RRKSESVLST 180
  181 DSDIRFTRRK LGDGQKCGCA VIAGFLIALL VAGIFVYVGY TYFRPEPLPD RVFRGRFMVL 240
  241 NDKWSMELAN QNSMRFQHKA RDYRERINLT LRRSDLREAY EGSEILALDG SEDNNNIVVH 300
  301 FNMIFDPYAG LVSSGDLLAL FHEEMTQPPQ QRRHFANMTV DVASLSIKET TGLIEEPIMS 360
  361 SSPLGGHDET TEPVVTTTPA PPRRCSPLEL SYCRQVGYNI TTYPNLLGHA SYEQLAEDVI 420
  421 VFRELVDGEC HREAYDFVCR LLQPPCDTHG SDLQPTPGQI CREYCESFMA GCGGRLPQRF 480
  481 RQFFDCERFP ESTGTQSCHQ KPHCVSDMQS NVQSPRLCDG YADCPDLSDE RSCAFCSPNA 540
  541 LYCGRGRACV PRKARCDGKA DCPDGADEKD CLSIAPLAAD LLQPEPLVPY LSRFHSAGYA 600
  601 VFSEKGVVGK LCAEGLEGDA KLVVRQTVSE SLCKSLGYES VEIFDVQNDT ERLNDYVRVL 660
  661 DPHAPEISFI RTHCPRRQVL YVGCGELRCG VQSALFNAKQ HLSLPKMSAP GDWPWLVALF 720
  721 REDIHVCDGT LITQDWVLTT EGCFQGQPRA TWMAIVGAVR LSAKAPWTQR RRIIGMIKSP 780
  781 VEGSTAALVR LETPVSYSDH VRPICLPDAL QRRLLQQPPA QRRSHVPVAE RLEGQLVSQQ 840
  841 RSRLSQENQQ FFLIPSQEQQ DSSTENQGDE DQDEQEDHFG GESAASYMPK AEALHQELDG 900
  901 YPLPDHAPQV NYYSSSSTVT SSSTAARIAT KAPILAAVPA AQEQIWTNCN TLGWSRQRDH 960
  961 LQRVQLKMGD MAPCENVSIA TVNSMCMEAT YQKYDCTQEE YSGAPVQCLI PGTNQWALIG1020
 1021 VSSWRIACGP TGVERPRMYD KIASNAAWIR ETISAI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle