YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG9657-PA, FBpp0...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	17	0.93
Transmembrane Helix	18	37	0.97
Cytoplasmic	38	69	0.95
Transmembrane Helix	70	90	0.92
Non-Cytoplasmic	91	100	0.75
Transmembrane Helix	101	123	0.89
Cytoplasmic	124	144	0.89
Transmembrane Helix	145	168	0.88
Non-Cytoplasmic	169	175	0.84
Transmembrane Helix	176	196	0.92
Cytoplasmic	197	205	0.68
Transmembrane Helix	206	225	0.90
Non-Cytoplasmic	226	255	0.93
Transmembrane Helix	256	275	0.90
Cytoplasmic	276	293	0.95
Transmembrane Helix	294	316	0.93
Non-Cytoplasmic	317	355	0.89
Transmembrane Helix	356	378	0.86
Cytoplasmic	379	398	0.91
Transmembrane Helix	399	420	0.94
Non-Cytoplasmic	421	426	0.81
Transmembrane Helix	427	449	0.84
Cytoplasmic	450	457	0.67
Transmembrane Helix	458	477	0.87
Non-Cytoplasmic	478	530	0.85
Transmembrane Helix	531	555	0.86
Cytoplasmic	556	601	0.86

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHVEELRASL QSFGWPDYLV FCLMLAICAV IGIYFCLQLR LESRKQKANG SEEAASSAAS  60
   61 YLVGGRQMKI FPITMSLISS FISGITLLGT PTEVYLYGAQ YMYIMGSLVL MGFCMYYFFL 120
  121 PVFHELNLIS TYKYLEQRYN RSLRLFGSVM FIVASLLWLP IVIYVPAIAF NQATGVNIHI 180
  181 VTPIVCVVCI FYTCIGGLKA VVWTDVIQTL IMFGAMALVL IKGTLDIGGP GVVWQKAQET 240
  241 ARLEVPNFSA DLSERYTFYS LVLGGVAHWL KSNAISQNMI QRYLSLPTLR DARIAIWTFI 300
  301 AGVLAFLMIC GYTGLLIYAT YSQCDPLETK LAQRNDQLLP LLVMDTLGSY PGLPGVFVAG 360
  361 VFSAALSSLS TGLNSLSAVV LEDFVKTFRK SPLTEGQTAF VMRSVVVVFG IIFVALVFAV 420
  421 EKLGAVLQLT ITLSSVANGP LLGIFTAGVM LPWVNSKGAL LGGFSSLIVM AWMCVSAQRD 480
  481 LVTGDLVYKR KPYSTMGCNY TFAGEPREFA SLALDGAISS VPSAPFQLYR ISYLYFTLFG 540
  541 ALVTIVVALV TSLLLRETDL DGVDTRLLTP FVRRWLERRR HRRSKIPDSG QKSSNKQETK 600
  601 T