YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG3192-PB, CG319...
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAFVKTVCL AQKLCAANPV VARQAIRSMA GWNKDYKPGP YPQTEKERLA AAKKYYLLPE  60
   61 EYKPYADDGL GYGDYPKLGY GLGVEAKDSY YPWDYPEHKR NQHEPISADH DLYSEDRWSQ 120
  121 AEPPRYSNAY YFACFLGVMS GCLALYYWLD DKKMYRPVAA KQYPSPGVKH YTFEK

Type	Start	End	Confidence
Non-Cytoplasmic	1	128	0.70
Transmembrane Helix	129	149	0.92
Cytoplasmic	150	175	0.71