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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG3160-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.56
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFMFRNCAVL LVIGSICCFI YGLFRLHVEV EPNACRMTYM FGEPMFAKVG VRDGDQYPNY  60
   61 ALYYYYEGLR QPLDPLKRRM TGAPVIFVPG NAGSYKQVRS LASVALRKAM SNDAGIHLDY 120
  121 YTIDYDEELS ALYGGYLHRQ QSYLKLCIRT ILSIYEGRTE QPSIVLIGHS MGGKLAQSVL 180
  181 VDPAIGQHIN TIISISTPLD QPVLNLDTQL EEFYDQTDAV LSKLRTATVP TMTTNVCDSL 240
  241 HQRPPSVQRM ASQDSSARLD NVLLISTGGG NRDLLVRPGL TSSRFNDLHA MTSAIPKVSL 300
  301 SCDHLSAVWC LQFMQAINRF LFSVAYVRED RSSIAFGTNK QRNLQTALST FVKPRRRQQN 360
  361 TVRFGAAGNW HEERRLVINK YFTNGLKGTF FDLIGLQRQE RYRKAAIEAL NVDDEDWLFG 420
  421 CSAEDNNKTG QLYCEKATSL MHLVQWLPNE DREPRSIALL DLHNLRKTYV HWTHLLVRLP 480
  481 PSAKRIGYNL DIYDPKERVT DIKMPRWYTM AKLPLINETL QGTLHHRVRI SEMVDPYQSI 540
  541 RVIVEPLQCI NPEYRVTARI CVPWAAGFER FQTLKSFDQK PQLYVNVPTL VPRHYNTTLN 600
  601 PVTLELYLDP TCRYRISYEY SYSSALSRLV LEFYGWLPAH LVCVLLIVLR KQVETFYDVG 660
  661 TFRSLRPYVG YLQYTSLYIV TACRLLKKLI ISSRVFPEPE PLDYSINVSI VIHCAAIALS 720
  721 LLATLGTWLA LTLYGNAFYR LALRITRLSQ ATSNVMISIM THLPITYGIL TIATAMGTCS 780
  781 GVGLLLAFVF YFLMLSNAYK DYLEDFLWQK AANLVRGKPS AVTEQEDATE EQNEEQNALK 840
  841 QNDEQKQQQQ EEEEPEACVG LQNFSFHVTL LLMLFVQLLL NAPSSLAWLR SRRHGINLPD 900
  901 PSLYPSIVVL ASLSLLLQLR APQKCQGYWM LSIAFYILAG VVLLYCQAAI YRLTYVIAGA 960
  961 FALLSAHQSL WILWGRVSRV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle