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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Ptp4E-PD, Ptp4E-...
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDCATRKQQQ LRAHHQQQQI QIQTHGRKRQ QLQKQRHNHH HYYQNSQQQQ KHFVWLVVGI  60
   61 LTIFLAQHAN AADLVINVPN ASSNANAFYR IDYSPPFGFP EPNTTIPASD IGKDIKFSRA 120
  121 LPGTEYNFWL YYTNSTHREQ LTWTVNITTA PDPPANLSVQ LRSSKSAFIT WRPPGSGRYS 180
  181 GFRIRVLGLT DLPFERSYSL EGNETLQLSA KELTPGGSYQ VQAYSVYQGK ESVAYTSRNF 240
  241 TTKPNTPGKF IVWFRNETTL LVLWQPPFPA GIYTHYRVSI TPDDAIQSVL YVEREGEPPG 300
  301 PAQAAFKGLV PGREYNISVQ TVSEDETSSV PTTARYLTVP ERVLNVTFDE AYTTSSSFRV 360
  361 RWEPPRTYSE FDAYQVMLST SRRIFNVPRA ANGDSVYFDY PDILEPGRTY EVVVKTIADN 420
  421 VNSWPASGEV TLRPRPVRSL GGFLDDRSNA LHISWEPAET GRQDSYRISY HEQTNASEVP 480
  481 APFPVAAESQ ITTNLTEYTL DSLLAGRRYL IAVQALSKGV ASNASDITRY TRPAAPLIQE 540
  541 LRSIDQGLML SWRSDVNSRQ DRYEVHYQRN GTREERTMAT NETSLTIHYL HPGSGYEVKV 600
  601 HAISHGVRSE PHSYFQAVFP KPPQNLTLQT VHTNLVVLHW QAPEGSDFSE YVVRYRTDAS 660
  661 PWQRISGLHE NEARIKDMHY GERYLVQVNT VSFGVESPHP LELNVTMPPQ PVSNVVPLVD 720
  721 SRNLTLEWPR PDGHVDFYTL KWWPTDEEDR VEFKNVTQLE DLSSPSVRIP IEDLSPGRQY 780
  781 RFEVQASSNG IRSGTTHLST RTMPLIQSDV FIANAGHEQG QDETITLSYT PTPADSTRFD 840
  841 IYRFSMGDPT IKDKEKLAND TERKLSFSGL TPGKLYNVTV WTVSGGVASL PVQRLYRLHP 900
  901 LPISDLKAIQ VAAREITLHW TAPAGEYTDF ELQYLSADEE APQLLQNVTK NTEITLQGLR 960
  961 PYHNYTFTVV VRSGSIQGTD FADVSVSTLM RSSAPISASY QTLTAPPGKV DYFQPSDVQP1020
 1021 GEVTFEWSLE PAEQHGPIDY FRITCQNADD AADVSSYEFP VNATQGKIDG LVPGNHYIFR1080
 1081 IQAKSALGYG AEREHIQTMP ILAPPVPEPS VTPLEVSRTS STIEISFRQG YFSNAHGMVR1140
 1141 SYTIIIAEDV GKNASGLEMP SWQDVQAYTV WLPYQAIEPY NPFLTSNGSR KSSLEAEHFT1200
 1201 IGTANCDKHQ AGYCNGPLRA GTTYRIKIRA FTDEDKFTDT VYSSPITTER SDTVIVAATV1260
 1261 SAVLLVAMVL VVVYCQHRCQ LIRRASKLAR MQDELAALPE GYITPNRPVH VKDFSEHYRI1320
 1321 MSADSDFRFS EEFEELKHVG RDQACSFANL PCNRPKNRFT NILPYDHSRF KLQPVDDDDG1380
 1381 SDYINANYMP GHNSPREFIV TQGPLHSTRE EFWRMCWESN SRAIVMLTRC FEKGREKCDQ1440
 1441 YWPVDRVAMF YGDIKVQLII DTHYHDWSIS EFMVSRNCES RIMRHFHFTT WPDFGVPEPP1500
 1501 QSLVRFVRAF RDVIGTDMRP IIVHCSAGVG RSGTFIALDR ILQHIHKSDY VDIFGIVFAM1560
 1561 RKERVFMVQT EQQYVCIHQC LLAVLEGKEH LLADSLELHA NDGYEVTKIY LERQPQTKMG1620
 1621 TLPIRASLAM AEKLDADLMT NKDEDEDQEQ QQQQQLQLAT EVKPKGSNDD EEDEEDDDDD1680
 1681 DDDQQPLNNE TTATLSSASC SSSTHDVHVV LQEAIEKPKQ EQERICAGTQ SHADTESDNT1740
 1741 DSDDDDEDGD GKVAKDGAVA DEDGWWY

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