YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0309090, egh...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSTTKHLLH CTLLITVIVT FEVFSGGIKI DENSFTLVDP WTEYGQLATV LLYLLRFLTL  60
   61 LTLPQVLFNF CGLVFYNAFP EKVVLKGSPL LAPFICIRVV TRGDFPDLVK TNVLRNMNTC 120
  121 LDTGLENFLI EVVTDKAVNL SQHRRIREIV VPKEYKTRTG ALFKSRALQY CLEDNVNVLN 180
  181 DSDWIVHLDE ETLLTENSVR GIINFVLDGK HPFGQGLITY ANENVVNWLT TLADSFRVSD 240
  241 DMGKLRLQFK LFHKPLFSWK GSYVVTQVSA ERSVSFDNGI DGSVAEDCFF AMRAFSQGYT 300
  301 FNFIEGEMYE KSPFTLLDFL QQRKRWLQGI LLVVHSKMIP FKHKLLLGIS VYSWVTMPLS 360
  361 TSNIIFAALY PIPCPNLVDF VCAFIAAINI YMYVFGVIKS FSLYRFGLFR FLACVLGAVC 420
  421 TIPVNVVIEN VAVIWGLVGK KHKFYVVQKD VRVLETV

Type	Start	End	Confidence
Cytoplasmic	1	7	0.89
Transmembrane Helix	8	28	0.88
Non-Cytoplasmic	29	53	0.82
Transmembrane Helix	54	76	0.78
Cytoplasmic	77	344	0.96
Transmembrane Helix	345	369	0.87
Non-Cytoplasmic	370	376	0.79
Transmembrane Helix	377	397	0.92
Cytoplasmic	398	405	0.85
Transmembrane Helix	406	428	0.89
Non-Cytoplasmic	429	457	0.92