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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Rbcn-3B-PA, FBpp...
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSTNLVVPV VLWGPTAPTH CISSVFLSDD QFTLVTGCYD GQICLWQVEP TTLKMSPRCL  60
   61 LVGHSAPVLC LVRASLLPEN NFLVSSSENG EMCTWDLTDG KCMEAVKLPQ VHTQIQSYHT 120
  121 ANSEDVRLFC IGYYAEIMVM DPFSLEVIYV LSSKVKPDWI SAIHVLRPMR RKDDVVLAIT 180
  181 TTGTVKVWTL TGNENKHAEP IYENESKEIR CLNAITMNCC AQNQRTVLLV CTKYWQIYDA 240
  241 GDFTVLCSVI APARERWQGG DFITSDRVML WTDEGKGYLY KLPANCIPDN KEFHSKSVVR 300
  301 DAPYLYYVLQ HAGDKVLSCP PAMKLLQGAG GQHNLLRGDS EGYISVWNVP EVPLDNISIL 360
  361 QAKQMPPRPL KPHVCTSLVE AWSIMDPPPV GILDQLSRIT ESPVKLTSSI YLPQQSRLVI 420
  421 GREDGSIVIV PATQTVMMQL LVGIKQNFSD WPSHQILYGH RGRVNCLLCP SMIHSRYEKS 480
  481 HLLSGGIDFA VCLWDLYSGS LLHRFCVHAG EITQLLVPPE SCSPRILKCI CSVASDHSVT 540
  541 LVSLQERKCV TLASRHLFPV VTIKWRPLDD FLIVGCSDGS VYVWQMETGH LDRVLHGMLA 600
  601 EEVLSACDEQ AEDGGSGGGG GSNGASASEM GMANPAVHFF RGLKSRNMNA IRHATQRGIT 660
  661 QLQQLQGHNQ GNFDFLMKHR SNPLVIQGLR TNPKDAESHI LFFDIEGLIF ELHSEEYAQM 720
  721 TPATLESLGV HLQNPKDGKS MHLDASKKIG DFFNKVKNKA VDVEKILKDK DKHGLVQKFK 780
  781 EKTEIVEKKV QAKVESLQKA VEPHEEQQDL KSKIASKMEV THVMEVAQLL LSLLHSWGLD 840
  841 PHLDKMCETR LGLLRPIVPI SYGVLSKAGY MSLLLPTWQN NYAIPPGIQL PSSSKKRPLP 900
  901 EELQRLEHLT AVFTSRLHWE LSTTLTTNHI LALVAMSNTL LSMSAASFLP DSEKHKKLQR 960
  961 LAQRTDSTLS NEEEREELMA HHISQIKHAW SLLATHHCFL LPDKIEALEP KKFKRPQVEM1020
 1021 MVKRWQHHCI EIREAAQQIL LGELTRMGKK GRKQLVESWA QYLPLYTHTE PIVGAQQQLA1080
 1081 LISQPASGGA GSGSGGNGGV GVGVSGGGGA GSGSGPGGSV PGGDAHQDED YEEEEEEIIR1140
 1141 KPSSLSELKR KQTTAVILLG VIGAEFGQDI SQESPNHRGS ISMATGANLT SGVAGGERRK1200
 1201 SSVVEGFGIA NNLARLTSMA LAHLLYAPPS PKLPQYTPLR RAAIDLLGRG FTVWEPYLDV1260
 1261 SKVLLGLLEI SCEGKAVPNL NYKLPLTPQA DACRTARHAL RLIATARPAA FITTMAREVA1320
 1321 RYNTMQQNAQ SINTPLTQSV LHKAKGEILQ CVEMLIDKMQ SEIAGLLVEV MDIALHCVDG1380
 1381 NELKNRGLAE LCPAICKFNQ ISHCAQTRRI AVGANSGNLA IYELRQNKCQ MIPAHTHPIT1440
 1441 SLAFSPDGKY LVSYSCAENR LSFWQTSTGM FGLGQSQTRC TKGYSTAPIP DVSRLNPMRL1500
 1501 AKLVWINNRT VTLMLADGSE TRFNV

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