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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Edem1-PA, FBpp02...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQKPRNNGY PGTLICAVLL VLLSTGVSGQ KQYSKARKLE LREDVRRMFQ HAYDGYLRHA  60
   61 SNYDELRPLT CDGHDTWGSY SLTLIDALDT LATMGNFTEF RRAARLLEEK MDFDRDINVS 120
  121 VFETNIRIVG GLLSAHLLSK RAGVELEPGW PCKGPLLRLA EDVARRLLPA FVTNTGMPYG 180
  181 TVNLRYGVPK GETSITCTAG VGTFLIEFGT LSRLTGKTIY EDVAMKAVHA LWAYRSPIGL 240
  241 FGNHIDVQSG RWTALDSGIG AGVDSLFEYL VKASVLLNRP ELLELFHEAR AAIDKYMRKE 300
  301 DWYVWVGMNK GRVTLPVFQS LEAFWPGILS IIGDTEPALR TISRYIGVWK KYGFLPEFYN 360
  361 IAAGEASPNR EVYPLRPELI ESAMYLYRAT GNEYLLEFGE HMLETLEFSA KTKCGYATIR 420
  421 NVVTHEKENR MESFFLAETS KYLYLLFDEE NFLHNDGSGG ELLSTEDDVC VVQAGAYIFN 480
  481 TEAHPMDMSA LHCCHAHNED IYTSLDLQRF SPRAILERSK KRQVAVQEQW VPQCHPENNE 540
  541 FFNKEDESVQ AQDSEKEQER EQSGTSTTMA VDIEVFDEFQ QPAGDLLVSN FEQIREEREL 600
  601 NESLHRNVVA RNQLTVSDLD EFFAQRRESF ASASEALNYV KTFMGNYTMD VAFIRGLQLY 660
  661 DTNMSSVLGT GAQKEYESRM RTLWQLYELQ QQYVANIRVI QGLGLLTFPA DGDRIPSHLT 720
  721 EVLDSLDKSA HLEHMDLQDL ETRVSNTSSP QLAHIREVIL KARNAYAIAM VNTSAMQEFA 780
  781 IRIYLSGTSE AGVRIHPLLE DGELSEEARK RPLKLAEERA LFSYARRIVD FRKRMAETVD 840
  841 RLQTLMQDIP PPKRKEATTD SQAADASTVY TQTKAQMAAP AQQPEPSQEE KQSTQIQKGK 900
  901 LAENGSGLGE EESGCVWSQL VQTILRKTTV QRVKFDEAVL QENTRKALEK YARKELPHHL 960
  961 FACHRPEYIE GFAYRDFYPE AL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle