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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG42666-PB
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQITNYFEH MDYVSFSVVA LPCVVIAVYG FLQVASGLAK CKNDKMQSCN KNSSSRITTT  60
   61 NNNVTTTSNI SGNSSNKRCP QKYTGNTLAV NSNMLAYQQQ ATAGGKNSTR KSRHNNNKQN 120
  121 HQQQQQQQQQ QFDHIHKRNG TAGGTGSECS PAAPTSNWLQ RGYGRQFVHS SCIEDKLLGH 180
  181 HNPGHRNSTS SDATSEDIDS SSELPNKSKG NSCAGSIHAS GGSKSRSKRH QKQSGQQTRN 240
  241 PDHNGQRTGA ATPCTGQKAK QGNAKWRQQQ PNPSSNNQQQ QMQQQMQQQK RGRNKKPGKW 300
  301 SNNIIDNPNS NHGGSSQQKT CDSSSSSALS SPTSSATTSA TSSPTNSPTS YPRANGNRKR 360
  361 IEAALEWRRE QELGRQNANF LVPPLRQYEQ LEFDDKTVVQ QLRRHIIDNH LLRVYGFPVD 420
  421 SVVHEGAIEI FKCMPHMSFA AALAETAQAV TVINYHDGLT NRAEEEVANS TDSGNSSPQS 480
  481 LDSESGGEWS GSECESSNSS SSSAGEAALG LELKYCHFVP VERSLSKPCA RCKRHFLVDE 540
  541 LTGQYLTHEE CQYHSGKYQR YYDGVSHGRW TCCNEGEESS PGCCLGDRHV WSGSVVGVNG 600
  601 PYYDFVRTEH RGSGEDEPAV YALDCEMSYT GRGLDVTKVS LVALNGQLVY EHFVRPVCDI 660
  661 IDYNTQYSGI TETDLCSGAK SLAEVQRDLL QLITADTILI GHGLENDLRA LRLVHNTLID 720
  721 TSISFPHCNG FPYRRALRHL TKVHLKRDIQ AGDGTTGHSS FEDSRACMEL MLWRVNRELD 780
  781 PAWSWDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle