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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0311392, cal...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.70
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFHKTFGYG CIVLICFELL FAGVETSSEN DDEYLTQKEI ILEKSYHGLI RENETLVEIT  60
   61 PLIKVNEEKI CNFHILKKPY HEIPFKIELV NNLGILKARR TLNCENRKSY HFEICAIYCD 120
  121 GTPSNTANVH ITVIDVNEYA PTFLEPSYVI EVDEGRLYNE ILRVEASDKD CTPLFGDVCK 180
  181 YEILNNDEPF SIDNEGSIKN TEPLSHKASH NHILSVVAYD CAMKESAPIM VSIKVRRVCE 240
  241 TKFVGMPERI DYTSGSTESL QLFPNARLDL CDISCKNEED LRIHSSIALK TKHISFGCDR 300
  301 DISNCTSGQK VKDLLPHGAE WTKELSYDEG LEPIFHFDGS TGVVVPATVI DHYDFSSQPF 360
  361 SILTLFRHNS QVEINKHVKE HIVCSADDHK MNRHHMALFV RNCRLIFLLR KNFNEGDLNI 420
  421 FSPAEWRWKI PEVCDNEWHH YVLNVEDSSK VDLFIDGVRF ENSIENRHSN PEVIDDWPLH 480
  481 AAHGVNTSLA IGACYQSLEN RLKHGFNGDI SEVKVSLNSV LTAEDIKCGT TCAEHLLAPK 540
  541 PLQSNNEKSY SDNSQIKENI EMNEIYISAK NKHDIEQFMR KVQYINTKQK PTVGRRNIEV 600
  601 LTTLNCKNES SLRLPPIETY IMVNEPIAPL GIDIDVVSAS LETSDLTPPS YSPKIAISGT 660
  661 SNKLVSYQEI KLGVHILEKT CIDSVSKNNG KLEEKNHIDS CSVVVFPSLN PDHEDIKIDG 720
  721 DESLSSSMDI KTNINKDGVE MIGKDTISNY INVLRSLVYS NKKPAYYLNR VFKLSCAQQS 780
  781 SQYKSGEYTL TLTVLHPKQT LFKSTNVLPS SLSKVNFIGN TDNETSFHRN SGSVNGNDNN 840
  841 QPTESKVYSY SLLHTNNVQE PKSHIHSFIH KAEGSHVTML IILVSVFLAV LLCGVSIARL 900
  901 KNNQKYIEHH QPCPKISDDG LIWDDSALTI TINPMQADVT SDASSESENS ESEDEEALKD 960
  961 GFTHINQLEW DNSNIFQQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle