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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Ephrin-PC, Ephri...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQERSKQLRL TVSWTQSKSQ IHDSCQRRSM LACKRRLTTS KVLEDSHPPV AFPNCKSHRH  60
   61 QQQKEKHKVQ LYSGKPLSIK LYVPGSIESI PKIRHKALTT TNKQQPAMHR KSKSKSKFQG 120
  121 FNNLKPLYSP SKRQPPEKHS SVLVEAGIES KASRHFVGKK RIKNRNCLLS SPQPSPMRCK 180
  181 MMIPFPKFGA TSFVTLLTLI CMETVLLSTM SSCAKTFYMH WNTSNSIFRI DNTDHIIDVN 240
  241 KGNLAFEFDQ VHIICPVYEP GTFENETEKY IIYNVSKVEY ETCRITNADP RVIAICDKPQ 300
  301 KLMFFTITFR PFTPQPGGLE FLPGNDYYFI STSSKDDLYR RIGGRCSTNN MKVVFKVCCA 360
  361 PEDNNKTTAL SNSKSVTDTG GAINVNIANN DESHVNSHGN NIAIGTNIGI NGGQIIGGPQ 420
  421 SAGIPINPLS GNNNINGIPT TINSNIDQFN RIPIQPNIIG NHVGTNAVGT GIVGGGGIIL 480
  481 TPGHAHGNIN MLQPGRGGIN GAYPGHHHIQ TGIRINNVPT QHNYPSHKGN ANSNINGNDD 540
  541 HHHYNKHPNE VVKNEELTYN SGAATSDGNI FALWIWILSI FPLLSIQSCH LSSYWISASF 600
  601 LVSTIAILGI HYLIQITLQT TVQRYSPGMV EITATSMNGM FDQNAGTIEY DR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle