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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pygo-PA
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHNLGMAPY RLPGPAGGLC PPDFKPPPPT DIISAPSNPK KRRKTSSAAN SAAAVAAAAA  60
   61 AAAAANSMQQ QQAPPTPQDL LPPPPMGGFG DTIIASNPFD DSPQVSAMSS SAAAAMAAMN 120
  121 QMGGGPGGGH FGGGGPGGHP HWEDRMGMGG GPPPPPHMHP HMHPHHPGGP MGHPHGPHPH 180
  181 MGGPPPMRGM SPMHPHQMGP GPGVGLPPHM NHGRPGGPGG PGGPVPMGSP MGGIAGMGGM 240
  241 SPMGGMGGPS ISPHHMGMGG LSPMGGGPNG PNPRAMQGSP MGGPGQNSPM NSLPMGSPMG 300
  301 NPIGSPLGPP SGPGPGNPGN TGGPQQQQQQ PPQPPMNNGQ MGPPPLHSPL GNGPTGHGSH 360
  361 MPGGPIPGPG PGPGGLVGPG GISPAHGNNP GGSGNNMLGG NPGGGNSNNN GSNTSNASNN 420
  421 NQNPHLSPAA GRLGVPTSMQ SNGPSVSSVA SSSVPSPATP TLTPTSTATS MSTSVPTSSP 480
  481 APPAMSPHHS LNSAGPSPGM PNSGPSPLQS PAGPNGPNNN NSNNNNGPMM GQMIPNAVPM 540
  541 QHQQHMGGGP PGHGPGPMPG MGMNQMLPPQ QPSHLGPPHP NMMNHPHHPH HHPGGPPPHM 600
  601 MGGPGMHGGP AGMPPHMGGG PNPHMMGGPH GNAGPHMGHG HMGGVPGPGP GPGGMNGPPH 660
  661 PHMSPHHGHP HHHHNPMGGP GPNMFGGGGG GPMGPGGPMG NMGPMGGGPM GGPMGVGPKP 720
  721 MTMGGGKMYP PGQPMVFNPQ NPNAPPIYPC GMCHKEVNDN DEAVFCESGC NFFFHRTCVG 780
  781 LTEAAFQMLN KEVFAEWCCD KCVSSKHIPM VKFKC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle