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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Cad99C-PA, FBpp0...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARNSLTPQ QGLGFFGLLI LLCSAVLGKS QMCEVETGQT NIILDIEESR ESFIGQPTTP  60
   61 PELPIFGDPD TEIALNLVFP KGQPIFQLNG KKLQLLQPLD RDEENLSHIV FQVSCTTRST 120
  121 GKKRTIPIIV RVSDINDNAP RFMNTPYEVT VPESTPVGTT IFRNIQALDK DAGVNGLVEY 180
  181 FIAEGSPNST NVEKYSADGY GTFAISFPHQ GQVTVAKTLD FEKIQTYYLT IVASDRARNT 240
  241 ADRLSSTTTL TVNIADSNDL DPSFIYSGCV SLDGACINPE YSASVPAGSL LGVLTVLPER 300
  301 IQAVDLDTIN SPIRYSFASG MPGNYADYFQ IDESTGVLKQ TKAVDTSTAK KYDIIVKAEE 360
  361 VSPGPQRFTT AKLEIFVKPV DANPPVISSS QAEGYVDENS PIGTRVLDAH GNPISFMTTD 420
  421 ADLSDSDPKP DYIYELTTPS FNVTGDGILV VNEENLDRDP PAPGRFKFQV VAREPRTNAA 480
  481 SAPLSLTVHL RDVNDNAPKL AMVAPISITA GDQSESRLVT QVTATDNDEG PNAVVTYSIY 540
  541 HVSNNGIQKF TINATTGEIR TQGRLLAGEQ YSITVQATDI GGLSSQAIVE VSVTPGPNTK 600
  601 PPRFQKPIYE VQVSEGAEIN STVTVVHAED PENDAVVYSI ISGNDLRQFA VGQESGVIIV 660
  661 IRKLDRESLT RYQLILKAED TGGLSSSATV NIKVTDINDK NPEFEASTLP YVFQVEEGKA 720
  721 QASVGVVHAT DADEGINAEI TYSIPTDIPF TINATSGEIL TAKELDYEQL NEYKFVVTAK 780
  781 DGAPDARLGT ASVTVMVLDL PDEVPKFSDA RIDVHIPENE ENFLVATVQA FDPDSMPEIT 840
  841 YVLRKGNAEL FKVSEKSGEV RTIKGLDYES QKQHQLTIGT IENDGNGPGD TILLVVDVED 900
  901 RNDLPPRFIT VPDPVTVNDD QGIGTIIATL PAIDGDGTSP GNVVRYEIVG RGKAPKYFQV 960
  961 DPDTGAVRIR DELRKEEDTE YQVDIRAYDL GEPQLSSVAP LRVDVHHLLS SGNNEIKLDN1020
 1021 KLESGTGMSS ESIGLAFSDD SYTTSVPESM EANSTLKLIQ IVNSKTSGDG PPAFRCEFVS1080
 1081 GNGGGIFNLS SADHGCNLLL IQPLDFENKS SYSLQLRLTS HRYFVNPLKD TTSVEIIVQD1140
 1141 ENDNAPEFEF NRLRGQQDTF YTVVTEEMDV DTTILQVRAT DRDSGKFGTV RYTLYDDDEN1200
 1201 RVNMPTSFFM MSEDTGVLRT AKHFKNENDF PLTFLVEARD SDGQEQGSHR TRARIVVNKL1260
 1261 ADINRMALSF PNAAPSDLRN YYTELEELLD KKTGLVSGIE RMSSQKYLAK NGSVIENPAA1320
 1321 TDIWFYLIDP KTEQLVSRKD SIVETTLLEP AARSELNIAL PRATAENISF PLERKEHVHK1380
 1381 VKAAVAIDNE VFPFTLIAIS LVILILGTIG IIYICISWSK YKNFKQRMRQ YSSTNPPRYD1440
 1441 PVIVNQQASS ASETIANMKE YETQMLAMAV PPDVDDDLQL DFSAKNHAFS LDNVSYITHK1500
 1501 ENTNGGGQSS PSHSDATTAT IATLRRHKNL NNASMNNNLA INNRQNTFNR TLEMNTRNNA1560
 1561 NPLASPPNGA LSGTLTLGRI KHQNSNHYQN GAYNIDPTGP NNMAHAKNNA YSTMGRRGNT1620
 1621 FGDVGLLNGN GELMNATLGR NGQLNNRLYG GEVPITNPLF QRSNSDHNHL SSTNENVSFG1680
 1681 KRDYGQIGFS YLNDLDRSEV ETTTEL

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