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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG11897-PA, CG11...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRTRRKVVR PKNPFTKANF FSQWSFWWMR DLFKRGLQGP LTDEELYQHR KTLDSERVTN  60
   61 KFAELWEDEL KRSNPSVVRM ILRAYGKIFV PMGLAFSISE TICKSLMPLF LGGLVGYFAT 120
  121 NQTDISENTA YLYAMGIVIC MLVPVITFHP FIFYIFQVGT KLRLALSGLI YRKVLQVSKS 180
  181 SSNDGLRGRA INILSNDLGR FDVALCFLHD TWKGPMESIL IGFLMYREIG ISAVIGVSFM 240
  241 LSFIPLQAWA AKKAAYYRQM TAERTDMRVK LMNEIIQGIQ VIKMYAWEKS FARVIAEVRL 300
  301 KEVKAIRGTA YIHAALGCTS MISPLSVFLA LCSYVYLGDP LTAQKVYTVS SYFNMLNDSM 360
  361 VTFWPMSITF IAEALVSAKR CKDFLLDGDK AEVPINLEAN QQTGKNKRKI SKKDKQKNVE 420
  421 LNGSLLSNGQ VHHNRLRDYD PEATKKCVVL KNVSASWDTS DGHANCAIED FSTDIKDQTL 480
  481 AAVVGPVGAG KSSFLNVLLG EVGIDKGEAM VHGKISYASQ ESWVFEGTIR DNIVFVEDYN 540
  541 ERRYKKVVKV CGLERDMELL PRGDLTVVGE RGVSLSGGQK ARVSLARAVY RKADIYLLDD 600
  601 PLSAVDTHVG KHIFDRCIRD FLSNKIRILV THQVQYLFDV EHLLLMGSGK IMAQGSYQEL 660
  661 QRSRQFQFLE QTQHDESGID THSVSSYLSR SDSEKSMEHQ HNQLLRPDEH VEDVNQEQQT 720
  721 VGSIKMHVYA SYIKALDSTF LLGIVISLFV CARIMLTGVD YFLSRWVIWE EQIAVNRTTT 780
  781 LLNETDTTIA NDTLPINATD PYIAPLLASD IQAGIRQELV LFYATILGAT LIVYLIRTFG 840
  841 FFKMCLRISL HLHDRLFRGI TRASMYFFNT NSSGRILNRF SKDIRTVDTD LPHTLLDCLA 900
  901 FIIDVSGVVI IVAIANYWLL IPAAIIGVIL GMIRYLYVNT SRSVKRLESI SRSPVFSLTN 960
  961 QTFQGLTTIR ALQAQSALEQ EFHEYQNTNT SAWFLFLSCT RAFALWSDVL CIVYMTAVTF1020
 1021 SFLLLKDEFD SGDVGLAILH STTMTGMCQW GMRQTAELEN QMTSVERVLE YTEQPSEALL1080
 1081 ETPEKFKPKS EWPSKGRIEF INFKLRYSPK EAPVLKDLNF TIEPREKIGI VGRTGAGKSS1140
 1141 IIQSIFRLAC NEGMIRIDDV DIEHIGLHDL RSQVSIIPQD PVLFSGTLRY NLDPMDERSD1200
 1201 EEMWKALGDV ELRSYVSTLI GGLNCRMYDG GSNFSVGQRQ LVCLARAILR HNKILIMDEA1260
 1261 TANVDPETDK LIQQTIRSKF AHCTVLTIAH RLHTVMDSDR VLVMDAGEVR ELGHPYELLQ1320
 1321 RTGGYLRQLV DNTGAATSFA LQQAAEQSYS KQILGDDTAA EDLNITLAME EKTQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle