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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0307764, htt-PA
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKSRSSAYD KFVGFVEQLR NTECSQKQKI TCFQQIAECI MSPSLAGHIN YAAHCGTATN  60
   61 VLLLFCEDVD SVVRMSAEEN LNKILRSLEK TRVSRILMDL YGEIKRNGNQ RSLRICLNLF 120
  121 SYYAPQIKEK HIKWYAVRLL QCMTTISQRK ETLLQETLCD FVKHFSRHIQ QGLSDSESCK 180
  181 LFETFLDQIS SDCAVKRRCS AQNCMSLIEN ARNRSLMARH GVNKVMELLL TDQQANSVLG 240
  241 ALGLLRLLLP QLIRGYPGDS HEDSESLAGK KQQQQQTTTS DCRQIIEIYD YCLHLLSTQH 300
  301 TANHAIINAT LEVINGILQA VDAASDGQCS QSLGQSLRQL LCNQQLQHNE YLRRRKSLKN 360
  361 QIFQLKNYEV ATSQHQLEDE DENEDVDELV VGATAMQMKK NSNAKLQQAK CREQQQHQHQ 420
  421 QQLEVDNSSL GINAGEDAPT EAPSSVADEG GEPESTKLRC HIRNAARSIS ECVASDEDKQ 480
  481 GQGHRQQRDE DGVVVAEDDD DDDDDDDDDD DMELLSAECD DFTTLSQLNE QQQALSAALK 540
  541 LPTTTAASSG GAATSQDDKL IDVDADVGGL PKPQHQSSLQ NLLAGSDDKS QHLSDIDNES 600
  601 FNSIDFDAEI TIAGSKEQQQ QHPPADDSVE SGDATAIGTF FNNLLSHSNA ASESVSKLFR 660
  661 QSSGSKSTPS KSASTPAPAD KSDAISAASL TLSLTSLASS NLEPPERQPL IAETPTPVED 720
  721 SCSITASHTA STALMMDAPA VEVAASKPET PQLRGTPNAN PFLVENSPLR QTVVGRALIT 780
  781 VKIGSILEQS LVYYTARLVA ARFLLSGQAA GLQPDSISRV SIKSLSLAVI AQCVRLAPKI 840
  841 LQLSLEISEQ ELQLLEEATS QIGSGDSTQV SSPQSSDNSQ VGGEKPPLDS SLVPTSLEEN 900
  901 LLLLDIKDDH FGPSTCPAYL QSATPTLSRS ADASVLLLEG GTTSSRSAKK SEEMLSKSEI 960
  961 IESSYRPTVA VEDVPPLSMP PRPPKRTKST RSRVGVLGTS STTESSSPQS RQKLSDILLF1020
 1021 HDHCDPILRG GVQQVVGNFL QSSGAGLFLD LQRGLGLQHL LAILLKGFED EIHTVVIQAL1080
 1081 NAFDKIFPNV VSKYLTEPPC HYHAHQQQQQ QQKEQQQQEQ DNQKLEQDLQ RHSSGQQKRS1140
 1141 GQAQTFGQQT FAKDQDNALS SQRQQQRRPN DAGTCANSSA TDNDELLAAL LNDFQLQSTG1200
 1201 MRQQPKNNST DTGQSGNEPD LEPNPNAAVE PFCVFAISPK LLLSKLRLCH HNKYWLVQNK1260
 1261 YAEVISNLNY VLLRSYYANF RCAIDNKNSG ARKQDSKWPP MDASSVCHSV RDAEGEDIVC1320
 1321 TYEAQFLAEL LHLLGDDDAR VREHAACCLC RFIMQTARQD PSQDQGAGGG GGDDIEGNGN1380
 1381 VNVETQQTNF NLLWDFFDYR IFGSMSVTLR NLFRASSTIV PPLAELDALA TSNSAPSYPD1440
 1441 TGSTSGSSTS TSASSGGSAA AVSAASAYFE ASYGIGIAEG HVFALASASQ RQIAQEEKVL1500
 1501 AKVLYRLTNK LMTLNDKNVQ FGIIYALRLL LRHFNFVDYQ QVWLEFNFVE ICISYAYYNN1560
 1561 ATAADLGCQN DLIDVMGKLM AGAMLSSGEP NTAHLDFLLR HSVKMLNIYY HLVTNQRPPT1620
 1621 AGSQSGSSSS KQPKSELFAR EQPAATLQAL GYFAGDYVYM KLYNILRGAN DSYKITINQE1680
 1681 AGSLLICLLK TCLHAVSLCL EGMASASPPE LKLIEEILHY LTRLINYAPA ECVACLRQLL1740
 1741 KYLFAQNYAS QVRLQPSAIG GNGSEIGHHA AFMRPYFAAK GRGHGASSTL LPTINSKPAV1800
 1801 AVGSQRGAPT DARQPIDAGP LQDMGMLFVH GLQPPTPPAG DCVRLIKLFE PMVIYCLTLF1860
 1861 MKSNALVQAP ILRLLSQLLD LNVTYSILDS KNVIFDQVLS NMDLIEGGID RNAFIMVPPM1920
 1921 LRFLVQLTHK SDRQLITIPK IISITNNLLA NGSVRVVALL ALKTLSYELF FMHSQLEEAL1980
 1981 DTEGHNSGRD ACQSPLSAAP TPETREALLA QRRELDTQRE VVLGMLEKFI EARPSQQVLA2040
 2041 LLLLFERSVQ QLDTPPYRSA QDADAVYGTL CRGLCSRQWR LHNAGDLRLL ESCFRNNGNH2100
 2101 VLADSKRFLQ LLQLFIEQGV GNFGDLALAM VMLSNVILKT EEIYLVNHIK LYLKNNPTAE2160
 2161 RRLQALMPSS PSAAPHWQDE APSTSSAAAA ARAAAASFSA GRSSISEINY FAKVLCEKLL2220
 2221 ACLEVLLGLE PSSSSHAYCQ LTGRFMDALL NVCCRSRHKD ALQSVFRLVL AESEFLCKYY2280
 2281 SLLLMSAAGL VGSYLLDAVL LACLRLVLAM RLEEPVALLE QAAQLPLKTN LQRALLREVC2340
 2341 RASAGCDWSA QQVRRLFEGR YLNFLIADHL EFICELCQER PECGSLLQVA LFRNAHRLSR2400
 2401 QSVRIVLRLL GRLCEPAERE ASGDVGSDAD PTLQAMQLLS RLHQLYEGER SLQLPIERMA2460
 2461 RRLSAQSGQP ARNVIYERLV EGDLAGGEDQ DALRTLLLKD LECRQDNETA TPSRIIDESW2520
 2521 LFAQLIKFAT QHADAPQQQK QLMLLLLEIQ SEPKLQRLLR SLGTEHEAKL LRHAIAGSLA2580
 2581 AMMSAFRQKC IQHAPHINYM QPTPLARVSC ALLMSRVAST EATKCRNPPT GEQLDVARAV2640
 2641 GALMACIRNA EQTALIYIDA RLMEKFVVEH LLRREHLPQL LAYLGWLAGA AKQILAMPTR2700
 2701 QESEQDALGV LLATVNTLLQ QPRVWRELNA SSDPSLRCEL LDLLDSVARC ILQDTIFYRR2760
 2761 HRRDRNKAKG PAPQAIFLAK LIETQIEIES LASGRVLAGV EEARLQFAGQ DLARFQVALS2820
 2821 LVTSIGISLL RTHQFYAYAV TPHELIQQPG DQQQEQQADG KLPSIPVDSL SDVDVLRQFV2880
 2881 KRLSIFGFTT RQQFEEYFMT CLLLINKLYD EHMVDQQEQF QIKQVCLQAI LELLMTYKTF2940
 2941 PIVGLANGQF HHTTRWQRIT CDSISLKKLH KVQLLVDACN VFYQPNLERQ LAYDNVIGTR3000
 3001 TFAPNQYDLN FSWAQMEDQA AAGVGVGVGV GLSGGEQANT ADIKQSCDAD VPDMAMRNYR3060
 3061 HFTQLSGIDF RSSTQLVFDV LQQMIELNHI LVLPNLVKFC EICESRDHIK WIKERCLKLQ3120
 3121 EQVAMDDTIS HQHIIYLLCR SQALLIPSLG ELQVLCSLIG NVYLKSTHSF IRIATLQGLL3180
 3181 CLLECCSKTN TTMGRLSEEL ALLRSLIVGY INRHGIIDES PLPFSVEHTK LVWTLNYSLI3240
 3241 EWTSKFVPQC HLLSNTIIAA NNFLKTTADE ELYLCVLHGL ERMVVNSGVP PPGIQPTGKD3300
 3301 AAAGEPGAEG SKAGVGVVVT PQMRHKIEKL ALELLKMENE KFSIPALKLL LSCMYVGSAA3360
 3361 QLENTELSNG IVQDDPEIIA QQNDKVDILL HCIKSSTRDA AWIYGQVLCQ IIRDLVPPNE3420
 3421 ILTKVIKEFL AINHPHCDVI AMIVYQVFRS AIDSSYLQML QDWLICTLPT FLDQPEQQGV3480
 3481 WGLSVIFLSA SINLHLIKLF PLVLGIGASN SAAAATTATT ATTEAEAAAP AMARKLGQHE3540
 3541 IALFVTAAQD FHAKLSGEQR QRFREAFGSF KRSQVYGRML QCL

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